Protein

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Genbank accession
QIN98561.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MSDIFAGITDAANDLYQEARDRLMGDGTTTLRFRNCGGIKMDAVTNEEHQSDLDIADNELESGAKASDHAAVQPKVITVTGVVVGYIDESIQESTIKDVTGLRSMDFLDAIQLPQVVSTALEGTRDFAVNKLASFIDWGGLDATISRSLVPWLPDFSIAEQLKSSDNMRIEQVYRTLLDLQKNVIYCDVDTGIFKYTNMLLKSVRVVQEKDGSATFTLTFREVIEVPIVVTNAVAAKSTGRPANNGTKKSGRAQGQGDATSKKDINTTTPISEKRVNDNRGFGVTLGDMFGFNLRGIF
Physico‐chemical
properties
protein length:298 AA
molecular weight: 32517,24100 Da
isoelectric point:4,89181
aromaticity:0,06711
hydropathy:-0,22617

Domains

Domains [InterPro]
DC_0601
STR
1–292
DC_0601
IPR048494
ATT
41–227
IPR048494
QIN98561.1
1 298
Architecture
STR
ATT
STR
STR 1-40 | ATT 41-227 | STR 228-292 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage rivia
[NCBI] 		2713316 Uroviricota > Caudoviricetes > Rosemountvirus >
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIN98561.1 [NCBI]
Genbank nucleotide accession
MT074438.1 [NCBI]
CDS location
range 37533 -> 38429
strand -
CDS
ATGAGTGACATCTTTGCTGGAATTACTGATGCTGCCAACGACTTGTACCAAGAAGCCCGCGACAGACTCATGGGCGACGGTACGACCACCTTACGCTTCCGCAACTGCGGAGGCATTAAGATGGATGCTGTCACCAATGAGGAACATCAGTCTGACCTTGACATCGCTGACAATGAACTTGAGTCCGGGGCTAAGGCTTCGGACCATGCTGCAGTACAACCAAAAGTTATTACTGTAACTGGCGTGGTAGTTGGTTATATCGACGAGTCAATTCAAGAGTCAACAATTAAGGATGTAACCGGTCTACGGTCTATGGATTTCTTGGATGCTATTCAGCTTCCACAGGTAGTGTCTACTGCGCTTGAAGGAACAAGGGACTTTGCTGTTAACAAGCTAGCATCCTTTATAGACTGGGGCGGTTTAGACGCTACCATTTCACGCTCTTTAGTTCCATGGCTTCCTGACTTTAGTATAGCTGAACAGCTTAAGTCTTCGGACAATATGAGGATTGAACAGGTATACCGTACCTTGCTGGATTTACAGAAAAACGTTATCTACTGTGACGTTGACACTGGTATCTTCAAGTATACGAATATGCTTTTGAAGTCTGTTCGTGTTGTACAGGAGAAAGATGGTTCAGCTACGTTTACCCTTACGTTCCGTGAAGTCATCGAAGTGCCGATTGTAGTTACAAACGCTGTAGCCGCTAAGTCGACAGGTCGCCCTGCTAATAACGGCACTAAGAAAAGCGGACGTGCACAAGGTCAGGGTGATGCCACCAGTAAGAAGGACATAAACACAACTACACCGATTAGCGAGAAACGTGTAAACGATAACCGCGGTTTTGGTGTAACACTCGGTGACATGTTTGGCTTTAACTTACGAGGCATATTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
71b856df2876c1aa92f3c467c5d1cc66e1329bded1e4cfa1f3d47ba48ab5d5ad
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6548
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank