Protein
View in Explore- Genbank accession
- YP_010740186.1 [GenBank]
- Protein name
- capsid and scaffold protein
- RBP type
-
TSP
- Protein sequence
-
MALSGSISKTVATYWRLSLSWTATQDVSANTSTITAKMYWEALDSYGVSSGATKSSGIKHDGGSWSVESKSGMASLSGHQKKLINTYTFTLSHNSDGTKSFSLDGYFKAEVTLRGTYYGSIDLDEKTFTLNTIPRESKLTSSASWQAGKSLPISISRYSSKFDHDIDIYVNNVKIKTVTGIGTSTTVNFSAGENEDIFRELAKNTSSWNQASKIVMRTMSGSTQIGSNTYTGTCSSPTATTVSGSSFTIGNSTSVSLTNEKNSAFVYDLTASIGSYTKTLLSKSTSLSVSWDTNSDKTSLLNQLPTSNSRTLTYTLTTYWKNGTSYTKVRNSTSSNVTAKVNTSTEKPTFSGGMTYADTNSKTTAVTGDSSYIIQGQSTLTVTLPSANLASASTGTTMKEYQCVVNGSTVIVAHPSTATNLTFTFSSSKLNASTNQTLTMKAVDKRGNYTAKTITVKFIPYSPPTLTSTALRDNSFDSNTKLTLRGNASPISIGGVNKNAIKSANYKYAEDGQSLPTTWTPFTGLTGLTSFTANVVTLNLDNSKSWNIQIYFADKLVGVYQNILVDVGRPIFFIDSKNRALGFNDMPANPNEILVNGRIRFGNTMWSSQAQGEGEAGALWMNNSDITGVNAMYFHDISQDYNGEGLMFLKSGATAGSPSPSDYDNLYARNGVLYFNGKPVTYQEDRIIWSGASFPNASTTLTMKRALSECPNGWILCWSDYDAAEKKYNDYNIVYTFIPKEHVVNLGYSGTGVYFSTPSTRTMTPNKYLYITDTTIKGNDDNAMSDSYADDVVLRYVLIW
- Physico‐chemical
properties -
protein length: 800 AA molecular weight: 86881,53470 Da isoelectric point: 8,74580 aromaticity: 0,10375 hydropathy: -0,34638
Domains
Domains [InterPro]
DC_1676
ATT
4–125
ATT
4–125
IPR008577
STR
24–235
STR
24–235
DC_0284
STR
529–800
STR
529–800
1
800
Architecture
ATT 4-125 | STR 126-800
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
800
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 133 | 133 | 0,0036 |
| Central domain | 134 | 332 | 200 | 0,6892 |
| C-terminal | 333 | 800 | 467 | 0,5148 |
Note: Constraints were applied during segmentation.
Fixed 113 C-terminal predictions appearing before Central domain|Sequence started with non-N-terminal domain
Fixed 113 C-terminal predictions appearing before Central domain|Sequence started with non-N-terminal domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-133
1-133
Central
134-332
134-332
C-terminal
333-800
333-800
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Bacillus phage FADO [NCBI] |
2917160 | Uroviricota > Caudoviricetes > Heleneionescovirinae > Zhangjivirus fado > |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
YP_010740186.1
[NCBI]
Genbank nucleotide accession
NC_073050
[NCBI]
CDS location
range 122219 -> 124621
strand +
strand +
CDS
TTGGCATTATCAGGTTCAATATCAAAAACGGTTGCTACATATTGGAGGCTGTCCCTTTCGTGGACAGCTACCCAAGATGTATCTGCCAACACATCAACAATTACAGCGAAAATGTATTGGGAAGCACTGGATAGTTACGGCGTTTCTTCTGGGGCAACAAAATCAAGTGGTATTAAGCATGATGGGGGTTCTTGGAGTGTAGAATCAAAATCTGGAATGGCGAGTCTCAGTGGTCATCAGAAGAAGCTTATAAATACATACACTTTTACATTATCACATAATTCAGATGGAACAAAATCGTTCTCTCTAGATGGGTACTTTAAAGCAGAGGTAACACTAAGAGGAACTTATTACGGATCAATTGATTTAGATGAGAAAACTTTTACATTAAACACTATCCCACGTGAATCAAAACTAACATCTAGTGCATCTTGGCAAGCAGGAAAATCGCTACCAATTTCAATATCTAGATATTCATCAAAGTTTGATCACGATATAGATATTTATGTTAACAATGTAAAAATTAAAACTGTTACTGGCATTGGAACAAGTACAACAGTTAATTTCAGTGCAGGAGAAAATGAAGATATATTTAGAGAGTTAGCCAAAAATACTAGCTCTTGGAATCAAGCTTCTAAGATTGTAATGAGAACAATGAGTGGTTCAACTCAGATTGGTTCAAATACATATACTGGAACGTGTTCTTCTCCAACAGCTACAACTGTTTCTGGAAGCAGTTTCACTATTGGAAATAGCACATCTGTTAGTTTAACAAATGAGAAGAATAGTGCTTTTGTATATGATCTGACAGCAAGCATCGGAAGTTATACAAAAACGTTGCTATCCAAATCTACATCGTTAAGTGTTTCATGGGATACAAATTCAGATAAAACAAGTTTGCTAAACCAGTTGCCTACTTCGAATAGTAGAACCTTAACATACACATTAACAACGTACTGGAAAAATGGAACTTCTTATACAAAGGTTAGAAACTCTACTTCTAGTAACGTAACTGCGAAAGTGAATACTTCTACAGAGAAGCCTACATTCTCAGGTGGTATGACATATGCTGATACAAACTCAAAAACAACGGCAGTAACAGGAGATAGCTCATATATCATACAAGGTCAATCAACATTAACAGTAACTTTACCATCTGCAAACCTTGCAAGTGCATCCACTGGAACAACAATGAAGGAATATCAGTGCGTAGTAAATGGTAGCACAGTAATTGTGGCACACCCTTCAACAGCTACAAACCTAACATTCACTTTTTCTAGTTCTAAGCTTAATGCATCAACAAATCAAACACTTACAATGAAAGCAGTTGACAAACGTGGGAACTACACTGCAAAAACGATAACTGTAAAGTTTATCCCATACTCTCCACCAACATTGACATCAACAGCTTTAAGGGATAATAGTTTTGACAGCAATACTAAGCTGACACTTAGAGGAAATGCATCTCCAATTAGTATTGGTGGCGTAAATAAAAACGCAATCAAATCAGCAAATTATAAGTATGCAGAAGATGGTCAATCTCTTCCAACAACATGGACACCATTCACTGGATTAACAGGATTGACAAGTTTTACAGCAAATGTTGTTACACTAAATCTTGACAACTCTAAGTCATGGAATATACAAATTTATTTTGCAGATAAGTTAGTGGGAGTATATCAAAATATTCTTGTAGATGTAGGTAGACCAATATTCTTTATTGACTCTAAAAATAGAGCATTAGGGTTTAATGATATGCCTGCAAATCCAAATGAGATACTGGTGAACGGAAGAATCAGATTCGGTAATACAATGTGGTCTTCACAGGCACAAGGTGAAGGTGAAGCAGGGGCATTATGGATGAACAACTCTGATATCACAGGTGTAAATGCTATGTACTTTCATGATATTTCTCAGGATTACAATGGCGAAGGATTAATGTTTTTGAAGAGTGGTGCAACAGCAGGTTCACCAAGTCCATCAGACTATGACAACTTATACGCTAGAAATGGTGTGTTGTATTTCAATGGAAAACCTGTAACTTATCAAGAGGATAGAATTATCTGGTCTGGAGCGAGCTTTCCAAATGCAAGCACTACATTAACAATGAAAAGAGCTTTATCCGAATGCCCAAATGGATGGATTTTATGTTGGTCTGACTATGATGCGGCAGAGAAAAAATACAATGATTACAATATTGTTTATACCTTTATTCCTAAAGAACATGTTGTCAATCTTGGATATAGTGGAACTGGTGTATATTTTAGTACACCTTCAACCAGAACTATGACACCAAATAAATATCTATATATTACAGATACAACTATAAAAGGCAATGACGATAATGCTATGAGTGATAGTTATGCAGACGATGTTGTATTGAGATATGTTTTGATTTGGTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
76a881c42e0334bc4617f3296fd564141441acf9de269abc27854b3c42c34698
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50