Protein

UniProt accession
A0A8S5LGH5 [UniProt]
Protein name
Collagen alpha 1(VIII) chain protein
RBP type
TSP
Evidence RBPdetect
Probability 0,54
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MIELSVSLASNGAVKLAGYEQMLRFGYTKNRGVYQLRIDAAGEWKGLAVRCFWHVPDGKDPPSSLVVDGYVNVPANVTAQPGSGCITFEGSDGTKTVTSADLRYRVAANSGTEDGTEPEPGTPAWQQLVDAVKESAASAEQSKTEALDAAERAGASAKKAGQALSDTITAKEDALKAIGDKQTTATQAVDTARDKALQQVEASTEAAQTAASEAAASAGNADQSAQEAADSLQELKDGIANGNFKGEKGDKGDTGPIGPVGPQGERGPQGPTGATGATGPQGEKGDTGPQGPKGETGPAVALDTTLTHGGEAADAKATGDAISAVKARQNILVGTETGNPIAVDDAFSAPLCGLTVYGKSTQVRTTGAQLISLNDSYGVVTVNGVTKTPIGISAWKLEGISKEDAIIYPYSSLTFLGLSKGDYVFSVFGTSKAKARYTIIGKGSSGYIQTGHSQKISIQEDVKLTFNYKIENGVESNGILMIMLNSGSTSLPWEPYTRGEPSPSPDYPQEIESAGDGGSVVVTLSDGNGKTQTLTLPTPNGLPGIPVTSGGNYTDPQGQQWVCDEVDLKRGVKVQRANAVDLSTCRVTAITKLTVVKRLSIRLLLYGRDYKTEALCNKLPFIVSFDKDVPHFYVDKTNVQIFIPLDAKPPEEGEYILFYALATPIETPLTPDEIAAYKALVAYGPDTVVRASDGAGIKLDYQRDVNIAIKKLEDAIASMT
Physico‐chemical
properties
protein length:720 AA
molecular weight: 75362,26710 Da
isoelectric point:4,90062
aromaticity:0,06111
hydropathy:-0,30458

Domains

Domains [InterPro]
IPR050392
81–349
IPR050392
IPR008160
245–298
IPR008160
A0A8S5LGH5
1 720
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctDo63
[NCBI] 		2823571 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD68991.1 [NCBI]
Genbank nucleotide accession
BK014713 [NCBI]
CDS location
range 2358 -> 4520
strand -
CDS
ATGATCGAACTTAGCGTATCTCTTGCCTCCAACGGTGCTGTAAAGCTGGCAGGCTATGAGCAGATGCTGCGCTTCGGCTACACCAAGAACCGGGGCGTGTACCAGCTGCGCATCGATGCCGCTGGCGAGTGGAAGGGGCTGGCCGTACGCTGCTTCTGGCACGTCCCGGACGGCAAAGACCCGCCCTCCTCGCTGGTGGTGGACGGCTATGTAAATGTGCCTGCCAACGTGACCGCACAGCCGGGCAGCGGCTGTATCACCTTTGAGGGCAGCGACGGCACCAAGACCGTGACCAGCGCCGACCTTCGCTACCGGGTGGCCGCAAACTCCGGCACGGAGGACGGCACAGAACCGGAACCGGGAACACCTGCATGGCAGCAGCTGGTGGATGCCGTGAAGGAATCGGCAGCATCGGCAGAGCAATCCAAAACGGAAGCGCTGGACGCGGCAGAGCGGGCCGGGGCATCTGCCAAAAAGGCCGGGCAGGCTCTCTCTGACACCATCACCGCCAAAGAGGACGCACTGAAAGCCATCGGTGACAAGCAGACTACCGCCACGCAGGCTGTGGATACGGCCCGGGACAAGGCTCTACAGCAGGTGGAAGCCTCTACAGAAGCCGCCCAGACCGCTGCCAGTGAAGCCGCCGCCAGTGCGGGCAATGCAGACCAGAGCGCTCAAGAAGCCGCTGACAGCTTGCAGGAGCTGAAGGACGGCATTGCAAACGGAAACTTCAAAGGCGAGAAGGGTGACAAGGGCGACACTGGCCCCATCGGTCCGGTCGGTCCGCAGGGTGAGCGTGGCCCTCAAGGCCCCACAGGCGCTACCGGAGCCACTGGCCCACAGGGCGAAAAAGGTGATACCGGCCCGCAAGGCCCTAAAGGCGAGACCGGCCCTGCCGTAGCACTGGACACCACCCTCACCCACGGGGGCGAAGCCGCTGACGCAAAAGCCACAGGCGACGCGATCAGCGCAGTCAAGGCCCGGCAGAACATCCTTGTGGGCACTGAGACAGGCAATCCTATCGCCGTTGACGATGCGTTCTCTGCGCCCCTGTGCGGCCTGACCGTATACGGCAAATCAACGCAGGTGCGCACGACTGGGGCGCAGTTAATATCATTAAACGATTCTTATGGAGTAGTAACAGTAAACGGAGTAACAAAAACCCCAATTGGAATTTCGGCATGGAAACTAGAAGGAATCTCCAAAGAGGATGCAATAATTTATCCTTATTCTTCGTTGACTTTTCTTGGCCTATCTAAAGGAGATTATGTATTTTCTGTATTTGGTACTTCAAAAGCAAAAGCAAGATATACAATTATTGGGAAAGGATCATCGGGATATATTCAAACTGGACACAGCCAGAAAATATCAATACAAGAGGACGTAAAACTAACTTTCAATTATAAGATTGAAAATGGAGTAGAATCGAATGGAATTTTAATGATTATGCTGAACTCCGGCTCCACTTCTCTCCCTTGGGAGCCCTACACCAGAGGCGAGCCATCTCCATCACCGGATTACCCACAGGAGATTGAGAGTGCAGGGGATGGTGGGAGTGTGGTGGTGACCCTGAGCGATGGGAACGGAAAAACGCAAACTCTCACGTTGCCCACTCCCAACGGCTTACCCGGCATCCCTGTCACCTCTGGCGGCAACTACACTGACCCGCAGGGCCAGCAGTGGGTGTGCGACGAGGTGGACTTGAAGAGAGGGGTGAAGGTGCAGAGGGCGAACGCTGTAGACTTGTCAACCTGTAGAGTTACGGCTATCACTAAGCTTACGGTAGTAAAACGACTTTCGATTCGGTTGCTGCTCTATGGTCGCGATTATAAAACAGAAGCCCTATGCAATAAATTGCCATTTATTGTTTCGTTTGATAAAGATGTCCCACACTTTTATGTAGACAAAACCAATGTGCAGATTTTTATTCCCCTTGACGCCAAACCCCCGGAAGAAGGAGAATACATTTTATTCTACGCTCTCGCCACCCCCATCGAAACCCCGCTCACCCCTGACGAAATTGCCGCCTACAAAGCCCTCGTCGCTTACGGCCCTGACACGGTGGTGCGGGCGAGTGACGGTGCGGGCATCAAGTTGGACTACCAGCGGGACGTGAACATTGCAATTAAAAAGTTGGAGGACGCAATCGCGTCCATGACCTAA

Gene Ontology

Description Category Evidence (source)
GO:0005576 extracellular region Cellular Component IEA:UniProtKB-SubCell (UniProt)

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

No tertiary structures available.

Literature

No literature entries available.