Protein

View in Explore
Genbank accession
AUR97584.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSCSDFPTIQTAKTFKLDAETQNEVVTSDNDRTSEASDGKTKKTLWGIENDATLQRENIDQLAEAQLQNIETTFTAQFAYKRIGNISLYVGDSLTETDKLNSYQYPDDSDEWYGPVQDQVFPITIPADPSSDNGWALVNALTPGSLQLYTDIVYKASGGNSAVENMVDGMPVAAPLNQVVMCENGSTFKRVSSDNGDESDFIAISEIHVDDFGAVGDGLVSRVTPLGQSIGGYEDIKNPSATDDRLKIKSCIDFANSSSVNVCYGNRGYALLTEDGSDAYMFRIETSQLGNRTVFTNDKAVGVGAGNVFATHQTNLVENIKITGFVFDDFEFAIRFNNTFGNEISDNVFKNCTVQLDTDDTAYPDNNNDNNLITRNRFLLTDYRKNPDYHENPTPEEVKSWGGTSFGLRFTSNPFDTKHVNMNGNRHNRVIDNRFEYAAYSGFEMAGPINEYNTVEGNYFYRNSGTGCEIDKGGTGNTIKYNTFEDTVATELEGGVAQAHIQLQRSGDNVPHDNSIIGNRFIDNIGDDYFMIKSQGSTENRFVDNKYTKDSPHMGGINIQSKIELVGLEGSLNTLIDDCVFSGLSLNRSDPSFPELDSIQVKGSVANSLTTTGTSTAYICNELSLSDTSFSDGLITLSVSPKVMNVFNTAVKNMSDIQIGTLTSLSSRRVTIRDLDISEMSDELTVRGEVVSIKGGEIRDGDSFASIKVQKAERVFIEQVTATNLTGTRLITIDNSPSDEAIAVVRENYADNAPEDVRIDASYTKQHVYNNSWQDFKEPI
Physico‐chemical
properties
protein length:780 AA
molecular weight: 85856,27110 Da
isoelectric point:4,44995
aromaticity:0,08718
hydropathy:-0,47538

Domains

Domains [InterPro]
DC_0489
STR
1–772
DC_0489
IPR012334
STR
206–631
IPR012334
IPR006626
Unmapped
317–338
IPR006626 IPR006626 IPR011050
IPR006626
Unmapped
425–447
IPR006626 IPR006626 IPR006626 IPR006626 IPR006626
IPR039448
ENZ
425–549
IPR039448
AUR97584.1
1 780
Architecture
STR
STR 1-772 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR97584.1
1 780
Domain Start End Length (AA) Confidence
N-terminal 1 243 243 0,9862
Central domain 244 769 527 0,9806
C-terminal 770 780 10 0,2917
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-243
Central
244-769
C-terminal
770-780

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.242.O._10N.261.54.B2
[NCBI] 		1881235 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio breoganii
[NCBI] 		553239 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR97584.1 [NCBI]
Genbank nucleotide accession
MG592607.1 [NCBI]
CDS location
range 18203 -> 20545
strand +
CDS
ATGAGTTGTTCAGATTTCCCAACAATACAGACAGCAAAGACTTTCAAGCTCGATGCTGAAACACAAAATGAGGTCGTTACGTCTGATAATGATCGCACATCAGAAGCCAGTGACGGCAAGACAAAAAAAACGCTTTGGGGGATAGAGAATGATGCCACATTGCAGCGTGAAAATATCGACCAACTAGCAGAGGCGCAGCTTCAGAACATCGAAACTACTTTCACGGCTCAATTTGCGTATAAGCGCATTGGCAACATTTCTCTATACGTTGGTGATTCACTAACTGAAACTGATAAGCTTAACTCTTACCAATACCCAGATGATTCAGATGAGTGGTACGGCCCAGTTCAAGATCAAGTTTTCCCAATCACAATCCCGGCCGACCCATCAAGTGATAATGGATGGGCTTTGGTTAATGCTTTAACGCCTGGCTCATTACAACTTTACACCGATATAGTTTACAAAGCTTCAGGTGGTAATTCTGCTGTTGAGAATATGGTTGACGGGATGCCTGTCGCAGCACCCTTGAATCAGGTCGTAATGTGTGAAAACGGTAGTACTTTCAAAAGAGTATCTTCAGACAATGGAGATGAGTCCGATTTTATTGCAATATCGGAAATTCACGTTGATGATTTTGGGGCGGTTGGCGATGGATTAGTTTCTAGAGTCACACCACTTGGCCAGTCTATTGGCGGATATGAAGACATAAAAAACCCTAGCGCAACTGATGATAGACTGAAAATAAAAAGCTGTATTGATTTTGCAAATAGTAGCAGTGTGAATGTTTGTTATGGTAATCGCGGGTACGCATTGCTGACTGAGGATGGTTCAGACGCTTACATGTTTAGGATTGAAACATCACAACTTGGCAATAGAACGGTATTTACTAACGATAAGGCCGTTGGAGTAGGTGCGGGTAACGTTTTTGCAACACACCAAACTAATCTCGTTGAAAACATAAAAATCACAGGATTTGTATTCGATGACTTTGAATTTGCCATTCGTTTTAACAACACGTTTGGAAATGAAATATCTGATAATGTATTTAAGAACTGCACCGTACAGCTTGACACTGATGATACAGCATACCCGGACAACAATAATGACAACAACCTGATAACAAGAAATAGGTTTTTGCTCACAGACTACCGTAAGAACCCAGACTACCACGAGAACCCAACACCGGAAGAGGTTAAAAGTTGGGGCGGGACTTCATTTGGTCTTAGATTTACTAGCAACCCTTTCGACACAAAACACGTAAACATGAATGGTAATAGGCACAATAGGGTGATTGATAACCGTTTTGAATATGCAGCTTATAGTGGTTTTGAGATGGCAGGGCCAATAAATGAATACAATACAGTTGAAGGTAATTACTTTTATAGAAACTCAGGTACAGGCTGCGAGATTGACAAGGGCGGAACAGGTAACACTATAAAATACAACACCTTCGAAGACACAGTTGCTACAGAGTTAGAGGGTGGTGTTGCACAGGCTCACATTCAATTGCAAAGGTCAGGTGATAATGTTCCACATGACAATTCAATAATAGGAAACAGATTCATAGATAACATCGGCGACGATTATTTTATGATTAAATCTCAAGGCTCAACCGAAAACCGTTTTGTTGATAATAAATACACAAAAGACTCCCCACATATGGGCGGAATAAATATTCAATCGAAAATTGAACTTGTTGGGCTGGAAGGCTCTTTGAACACTTTGATTGATGACTGTGTGTTCAGTGGGCTTTCGCTAAACCGGAGTGATCCATCCTTTCCAGAACTTGACTCAATACAGGTCAAAGGTTCAGTTGCGAATAGCTTAACAACTACAGGTACGTCAACAGCCTACATATGCAATGAACTTTCGTTAAGTGACACTAGCTTTAGTGATGGATTGATAACCTTGAGTGTCTCACCAAAAGTAATGAATGTTTTTAACACTGCCGTTAAAAACATGAGTGATATTCAAATAGGAACCTTAACAAGCTTATCATCAAGGAGAGTAACAATTAGAGACCTTGATATTTCTGAAATGTCGGACGAGCTGACAGTTAGAGGTGAAGTTGTAAGCATAAAAGGTGGAGAAATAAGAGATGGTGATTCATTTGCAAGTATAAAAGTTCAGAAGGCTGAAAGGGTATTTATTGAGCAAGTTACCGCTACAAACTTAACAGGTACAAGGTTAATCACAATAGATAATTCCCCTTCAGATGAAGCGATTGCTGTGGTCAGGGAAAACTACGCAGATAACGCGCCGGAAGATGTACGTATTGATGCCTCTTACACCAAGCAGCATGTTTATAATAACTCATGGCAAGATTTCAAAGAGCCAATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8749303486c465f2ee930ff8b480b3500ba3ec34be56e55ea656d46122eff1e8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7345
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank