Protein

View in Explore
Genbank accession
WCZ57929.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MNYGVGDFHLRDSRSYIQPYEVVSDGQLLSRADWPELWAYAQMLTPIADADWLADPSQRGKYSLGDGSTTFRVPDRNGVQEGSIKGLFGRGDGGISAQAGSILRSAAPDVSGNVQGRTSVTTGALFNGGGGAFITSNQATMLDQTVAGATQGTIRDRYTDLTMRLSAVSGAYGRNGETADVYPSNFTGVWVIRASGGFVAANTSWTVYNSDQTLPPANTTANGGVVRSEYQVGGSLRAAASFVAQHTTRTDGSPTASLQLGVSDGSNSATWWYKANGHITSSTGRFFFDGVLNPGGNVEVGAGEFCSFILEDKDSADADGVGKWWSWALDGRYGSYFIKRLRGGINTGQIVINMPSSAGTIALQGTSGINFKHDIKDADLTEAMDRIEAMRMVNFIYNDDEENRVRFGIIAEEAELIAPQYIKHNQEPYEDILDEEGNKIGEKTRDRPSVDVNPIVMDLMGCVQALHAKIKALEARIAELESKE
Physico‐chemical
properties
protein length:484 AA
molecular weight: 52102,05800 Da
isoelectric point:4,87942
aromaticity:0,08884
hydropathy:-0,34298

Domains

Domains [InterPro]
DC_1877
STR
12–484
DC_1877
IPR030392
CHP
367–477
IPR030392
IPR030392
CHP
369–420
IPR030392 Coil
WCZ57929.1
1 484
Architecture
STR
STR 12-484
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K38
[NCBI] 		3027626 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ57929.1 [NCBI]
Genbank nucleotide accession
OQ291035.1 [NCBI]
CDS location
range 80187 -> 81641
strand -
CDS
ATGAACTATGGCGTCGGTGACTTCCATCTCAGGGACAGTCGTTCCTATATCCAGCCTTATGAGGTAGTTTCTGATGGGCAGCTTCTTAGCAGGGCTGACTGGCCGGAGCTTTGGGCGTATGCGCAGATGCTTACTCCAATTGCCGATGCAGACTGGCTTGCAGACCCATCACAGAGAGGTAAGTATTCACTTGGTGATGGTTCAACTACATTTCGCGTCCCCGACCGTAATGGCGTGCAAGAAGGGTCTATTAAAGGGTTGTTTGGTCGTGGTGACGGTGGCATCTCGGCACAGGCCGGTAGTATATTGCGTAGTGCAGCGCCCGATGTTTCCGGTAATGTTCAAGGAAGAACCAGCGTGACAACGGGTGCTTTATTTAACGGTGGTGGTGGCGCTTTCATTACCTCTAATCAGGCAACGATGCTTGATCAGACTGTGGCTGGAGCCACTCAAGGCACTATACGCGACAGGTACACCGACCTGACTATGCGCTTATCCGCTGTGAGTGGTGCATACGGTCGAAATGGGGAGACGGCGGATGTTTACCCAAGTAACTTCACAGGTGTATGGGTTATCCGTGCCTCAGGTGGCTTCGTGGCGGCGAATACGTCTTGGACAGTTTATAACTCTGACCAGACACTACCGCCCGCCAACACAACCGCAAACGGCGGTGTGGTTCGCAGTGAATATCAGGTAGGCGGCTCGCTTAGAGCGGCGGCGTCATTCGTGGCGCAGCACACGACACGAACAGACGGATCACCTACTGCGTCACTTCAGCTCGGAGTATCAGATGGCTCTAACTCTGCTACGTGGTGGTATAAGGCAAATGGGCATATCACATCATCAACCGGTCGGTTTTTCTTTGACGGGGTGTTAAACCCAGGCGGCAATGTGGAAGTCGGTGCAGGTGAATTTTGCTCTTTCATTCTGGAAGACAAGGACTCAGCGGACGCTGACGGCGTCGGCAAGTGGTGGTCGTGGGCGCTTGATGGCCGTTATGGATCGTATTTCATCAAGCGATTGCGCGGCGGGATTAACACTGGGCAAATTGTAATCAACATGCCGTCTTCTGCCGGTACAATTGCATTACAGGGTACATCTGGTATCAACTTTAAGCATGACATCAAAGATGCAGACCTAACTGAAGCGATGGATCGAATTGAGGCGATGCGCATGGTCAACTTCATCTATAACGATGACGAAGAGAACCGTGTTCGCTTTGGCATCATCGCTGAGGAAGCTGAGTTAATCGCACCGCAGTATATCAAGCACAATCAGGAACCTTACGAGGACATTCTTGACGAAGAAGGGAATAAGATTGGTGAGAAGACAAGGGACAGGCCGTCCGTGGATGTGAATCCAATCGTTATGGACTTGATGGGGTGTGTTCAGGCGCTTCATGCCAAAATAAAGGCTCTGGAAGCGCGTATTGCAGAACTAGAATCTAAGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
786bf53666df20c02bb6c2a8552b396f5b8d1f7db76fff33b0995ba64ad46720
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7074
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K38 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank