Protein

View in Explore
Genbank accession
QBI82420.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MYSPRPYGRFAEDAELSADDAAAVERLARNLTNFKQASDLANLKRVAGLPSGRQAVAIDMGGVFRILVLEQHELPQFRFDGVAQTNIPMLFSGVITRAQVLTDGQGVGIRLTEQTRRRLVAYDPKAALPPKDVALQRFVIKYEPRFQYFEPPQQGIYTFTQYVKQRPTWYSGAMAEVMQVAGGYGRQVMAELPEDDLERARMLIPERYMRQIRQQVGNVRLPAYTGFPDEQGQFKCEYRASRCNVVAFDTGNSPWLLQINARGVYAMPLPVVPATTTEAFREYVLEVGDDELLKLLDRFGGMPTGEGFPQAEQDFEAWRRAGVIIKVCDTADFYSFEAMYAACGWAVNSRGTEGFNTCWTYDSAGLMQVHAYKMKLSLAPAENQGRLLNTWDYDSYSDVREAQGKLNAYLAKVYEALAENGARELAIKYKMRCVPAAEVHVRADSSSGPDVDYWDSLELPPIAAHQGRVSRVSSGPFYWPSKVLKSCTRLKFPELTGQGCESFPHISPDYSGGAVKCDTIVFGCYVEDQLRVIKYFYDERKFQQETTSTFEQYMIVGQWEKTETFGLSGLMGFFYTTDFDDRQEQPAVTVHTNIVGTDMGYGNPAYSTPPTLWCVGGVSRSRYYRQRTTVDTTETFTLDVAALVPVFERDCMLYAYQDHTGGRSSHEETTQGSVPDPTSYELWCYDDIWHWMGQTRNGNRGDPPSKDGVPVYVDTLVYSPTEISDFAESGNWLNLPPGGFLDVTGICGPYTYRNSVHNANGVIIGGEAPGFDPYRKDTQYPNESSGRLSVCLSVAGAVQVNKDMPHSWYWGFSPENDFYFYRDAVHVAIGDARYASIYETGQDGLRRRWGHTALADHKAAHHFIGVINE
Physico‐chemical
properties
protein length:869 AA
molecular weight: 97694,47000 Da
isoelectric point:5,29185
aromaticity:0,12313
hydropathy:-0,41013

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBI82420.1
1 869
Domain Start End Length (AA) Confidence
N-terminal 1 275 275 0,8174
Central domain 276 475 201 0,6980
C-terminal 476 869 393 0,5413
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-275
Central
276-475
C-terminal
476-869

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_Pae_CF63a
[NCBI] 		2563582 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBI82420.1 [NCBI]
Genbank nucleotide accession
MK511040 [NCBI]
CDS location
range 19780 -> 22389
strand -
CDS
ATGTATTCGCCGCGCCCCTACGGACGTTTCGCGGAAGACGCGGAGCTTTCCGCCGACGATGCCGCCGCTGTCGAGCGGCTGGCCAGGAACCTGACGAACTTCAAGCAGGCGTCTGACCTCGCCAACCTGAAGCGCGTTGCGGGCCTGCCCAGCGGCCGGCAGGCGGTGGCCATCGACATGGGCGGAGTGTTTCGCATCCTGGTGCTCGAGCAGCATGAGCTTCCGCAATTCCGTTTCGACGGGGTGGCACAGACCAACATCCCCATGCTGTTCTCCGGCGTCATCACCCGCGCCCAGGTGCTGACCGATGGGCAGGGCGTTGGCATCAGGTTGACCGAGCAGACCCGGCGCCGGCTGGTGGCCTACGACCCGAAAGCGGCGCTTCCGCCGAAGGATGTGGCGTTGCAACGCTTCGTCATCAAGTACGAACCGCGCTTCCAATACTTTGAGCCGCCCCAGCAGGGCATCTACACCTTCACGCAGTACGTCAAGCAACGCCCGACCTGGTACAGCGGCGCCATGGCCGAGGTCATGCAGGTGGCTGGCGGATATGGGCGGCAGGTCATGGCCGAACTGCCAGAGGACGACCTTGAGCGCGCAAGGATGCTGATTCCCGAGCGTTACATGCGGCAGATCCGCCAGCAGGTCGGCAACGTGCGGTTGCCGGCCTACACCGGCTTCCCGGACGAGCAGGGGCAGTTCAAGTGCGAGTACCGCGCCAGCCGCTGCAACGTGGTCGCCTTCGATACCGGCAACAGCCCGTGGTTGCTTCAGATCAATGCGCGGGGCGTCTACGCGATGCCGCTTCCTGTGGTGCCGGCCACCACCACCGAGGCTTTCCGTGAGTACGTGCTGGAGGTTGGCGACGACGAGTTGCTGAAGCTGCTGGACCGCTTCGGCGGAATGCCGACTGGCGAGGGCTTTCCGCAGGCGGAACAGGACTTCGAGGCGTGGCGCCGGGCCGGGGTCATCATCAAGGTCTGCGACACCGCCGACTTCTACAGTTTCGAGGCCATGTACGCTGCGTGCGGCTGGGCGGTGAACAGCCGAGGCACCGAGGGCTTCAACACCTGCTGGACCTACGACAGCGCCGGCCTGATGCAGGTGCATGCGTACAAGATGAAACTGTCGTTGGCGCCTGCGGAGAACCAAGGCCGTCTGCTCAACACCTGGGACTACGATAGCTATTCGGACGTGAGGGAGGCGCAAGGCAAGCTCAATGCATATCTTGCGAAGGTCTATGAGGCACTGGCAGAGAACGGGGCGCGTGAACTGGCCATCAAGTACAAGATGCGCTGCGTTCCGGCCGCCGAAGTCCACGTCCGGGCCGACTCGTCCAGCGGCCCGGACGTGGACTACTGGGACAGCCTGGAACTGCCGCCCATCGCCGCCCATCAGGGCCGTGTGTCGCGCGTCTCCAGTGGTCCGTTCTACTGGCCGTCCAAGGTCTTGAAGTCTTGCACCCGCCTGAAGTTCCCCGAACTGACGGGGCAGGGGTGCGAGTCCTTCCCGCACATCTCGCCCGACTATTCCGGCGGCGCAGTGAAGTGCGACACCATAGTCTTCGGCTGCTATGTCGAGGACCAGTTGCGTGTCATCAAGTATTTCTACGACGAACGCAAGTTCCAGCAGGAAACGACAAGCACGTTCGAGCAGTACATGATCGTCGGCCAGTGGGAGAAGACCGAAACCTTTGGTCTTAGCGGGCTGATGGGGTTCTTCTACACGACCGACTTCGACGATCGGCAGGAGCAGCCGGCGGTAACGGTCCATACCAACATCGTCGGCACCGACATGGGCTATGGCAACCCGGCTTACTCCACGCCGCCAACACTCTGGTGCGTCGGCGGCGTGAGCCGATCCAGGTACTATAGGCAACGCACCACGGTAGACACTACCGAGACGTTTACCCTGGACGTGGCGGCGCTGGTGCCGGTGTTCGAGCGAGACTGCATGCTCTACGCCTACCAGGACCATACCGGGGGACGCAGTTCCCACGAGGAAACGACGCAGGGCTCTGTGCCTGATCCCACGTCCTACGAACTCTGGTGCTACGACGACATCTGGCACTGGATGGGGCAGACGCGGAACGGGAACCGGGGCGACCCGCCATCCAAGGATGGGGTGCCTGTCTATGTCGACACGCTGGTCTACAGCCCCACCGAAATCAGCGACTTCGCCGAGAGTGGCAACTGGCTGAACCTGCCACCTGGCGGGTTTCTGGATGTCACGGGCATCTGTGGGCCGTACACCTACCGCAACTCCGTCCACAACGCCAACGGCGTCATCATCGGCGGCGAGGCGCCAGGCTTCGATCCGTACCGGAAGGACACCCAGTACCCCAACGAGAGTAGCGGGCGCCTGAGTGTGTGTCTGTCCGTGGCCGGCGCTGTTCAGGTCAACAAGGACATGCCGCACTCGTGGTACTGGGGCTTCTCGCCCGAGAACGACTTTTACTTCTACCGCGACGCCGTGCATGTCGCCATCGGCGACGCCCGGTACGCCAGCATCTACGAGACGGGCCAGGATGGACTGCGCCGCCGCTGGGGGCATACCGCACTTGCCGATCACAAGGCGGCCCACCACTTCATAGGGGTTATCAATGAGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
e57b81d2738ab37471e220435b6f4cd5cfa9ad5edb7d688b92326b1ca2526a21
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2965
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Mobilizing temperate bacteriophage communities and resolving individual phage genomes from cystic fibrosis and bronchiectasis Pseudomonas aeruginosa isolates Tariq,M.A., Everest,F.L.C., Cowley,L.A., Wright,R., Holt,G.S., Ingram,H., Duignan,L.A.M., Lanyon,C.V., Perry,A., Perry,J.D., Bourke,S., Brockhurst,M.A., Bridge,S.H., Soyza,A.D. and Smith,D.L. 2019 — GenBank