Protein

View in Explore
Genbank accession
UYE90206.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,83
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MASTFWIGTNVKVTNGSATVEVTSGDVITKVKASAMFVASNFSLPYEVERTYTTGGKDYIVLKENWQGASGTGLSAVAVTSPAGIEEARQTLLSLISTYESFANSVKPTVEGNAVVQRTSAGRIKTANAVSSDEAVAYGQLGSAATKDVGTSAGNVMEVGAFGFGGISPAQSPNGDLNDIERTGVYDVDGATLNTPPAFNPKNGMCLHLSRTDTLATQLLYSRRTTQMFMRVNEGSGWENWAEFYHSGNSVNPLDYGIGIHRHNDGSPTEMKNVSADALAGGLYTGYEGLNNNATLGDNPFTDSGAAYGLLNITGVDPDPTKYIFQLAGQYSGYRLRWRAATVSGFSTWRDVYHSGNTNFNEFGGNGNECIATGEIVTSTIARFYLPINAKTKPVSLSIIGSFNVFRLSGSVVSGAGTGSFALSAISSPKMAVIDVTGSGLTLGEVVNLRCAVNNAKITVNF
Physico‐chemical
properties
protein length:462 AA
molecular weight: 48649,56810 Da
isoelectric point:5,49834
aromaticity:0,09091
hydropathy:-0,10866

Domains

Domains [InterPro]
DC_1143
STR
18–250
DC_1143
cd19958
STR
174–245
cd19958
UYE90206.1
1 462
Architecture
STR
STR 18-250 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYE90206.1
1 462
Domain Start End Length (AA) Confidence
N-terminal 1 230 230 0,7526
Central domain 231 429 200 0,0122
C-terminal 430 462 32 0,9897
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-230
Central
231-429
C-terminal
430-462

Taxonomy

  Name Taxonomy ID Lineage
Phage Alteromonas phage vB_AemP_PT15-A5
[NCBI] 		2981567 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Alteromonas mediterranea
[NCBI] 		314275 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE90206.1 [NCBI]
Genbank nucleotide accession
OP481051.1 [NCBI]
CDS location
range 8050 -> 9438
strand +
CDS
ATGGCTAGTACATTTTGGATTGGCACAAACGTAAAGGTAACTAATGGTAGTGCTACTGTTGAAGTTACTTCTGGTGATGTAATTACTAAAGTTAAAGCGAGTGCTATGTTTGTAGCAAGCAACTTTAGTTTACCTTATGAAGTAGAGCGTACATACACTACAGGTGGTAAAGATTACATCGTATTAAAAGAAAACTGGCAAGGTGCTAGCGGTACTGGATTAAGTGCAGTAGCCGTTACTAGCCCTGCTGGTATTGAAGAAGCTAGACAAACATTACTAAGTCTTATTAGTACGTATGAAAGTTTTGCTAATAGCGTTAAACCAACTGTTGAAGGCAATGCAGTTGTACAGCGCACTAGTGCAGGACGTATTAAAACTGCCAATGCAGTATCTTCTGATGAAGCAGTAGCTTATGGGCAGTTAGGTAGCGCTGCTACAAAGGATGTAGGAACTTCTGCTGGCAATGTAATGGAGGTTGGTGCTTTTGGCTTTGGAGGAATTTCTCCTGCGCAATCCCCCAATGGGGATTTGAATGACATAGAACGTACAGGTGTCTACGATGTAGATGGCGCAACTTTAAATACCCCTCCTGCGTTTAATCCAAAAAACGGAATGTGTTTACATTTATCCCGCACAGACACTTTAGCTACTCAATTACTATATAGCCGCAGAACAACCCAAATGTTTATGCGCGTTAACGAGGGTAGTGGTTGGGAGAACTGGGCAGAATTCTACCACAGTGGTAACTCTGTTAATCCTTTGGATTATGGAATAGGTATACATCGTCACAACGACGGATCTCCCACCGAAATGAAAAATGTTAGCGCAGACGCATTAGCAGGAGGTCTTTATACGGGTTACGAAGGTCTAAACAATAACGCTACACTTGGAGATAACCCATTTACAGACTCAGGCGCTGCTTACGGGTTATTAAACATCACAGGCGTTGACCCCGACCCCACGAAGTATATATTTCAATTAGCGGGGCAGTACAGTGGCTATAGACTGCGTTGGAGGGCTGCTACCGTCAGTGGTTTCTCTACATGGCGTGATGTCTATCACAGCGGTAACACTAACTTTAATGAGTTTGGTGGGAATGGTAATGAATGTATCGCCACAGGGGAGATAGTAACCAGCACTATTGCGAGATTCTATTTGCCTATTAATGCTAAAACGAAGCCCGTATCTTTAAGTATTATAGGGTCATTTAACGTTTTCAGGTTGTCAGGTTCGGTTGTTTCTGGTGCAGGTACAGGAAGTTTTGCTTTATCTGCCATATCTAGCCCTAAAATGGCAGTAATTGACGTAACAGGTAGTGGTCTTACATTAGGTGAAGTGGTCAATTTAAGATGTGCAGTAAATAACGCAAAAATCACTGTAAACTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
23fcb4f8a416e07881dd77c98263b3725ebdf4f1e7d589419ea6832757b8ff95
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7730
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Structural and functional assessment of homologous host recognition modules used by distant Alteromonas phage families Gonzalez-Serrano,R., Rosselli,R., Roda-Garcia,J.J., Martin-Cuadrado,A.-B., Rodriguez-Valera,F. and Dunne,M. 2023-03-07 — GenBank