Protein

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Genbank accession
XNL96044.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,65
Protein sequence
MLSPISDSEWLSDAQKRGQYSTGDGSTTFRVPDRNGVQVGSIKELFGRGDGGISSNNGVIYDSAAPNIRGKVAGVSAGTYAGIFGTSVQDSFYTDNSLYPAGGGDTIPPGSGAVDGRNNTLVFDASQSNPVYGRYSISDNIIPRNFVGVWTIRAHGGFTAANTSWSVINSDSAAPALNTSVVGGKVESKYTNPTSSQYARMYISSSWGSVCSAVIEAQGASTHAYKFYEDGTVDFRQSGKTNPFRMYTPTGIWTGLTDAGPNNLTTNGMDRVAISSGSDTVVRGYSIGGSKPNGYPTKVGHHMYLPGNDAFGIACTTIGGDNGRFCRYFYDIDGQMYGSTDYGNFSYTKSGVSDENLKHNIVDIDAERAIEVIKGLKFKSFVYNDDEKNRSRRGIIAQQAETVEPLYVKTRKYPGMEKGSPEIEQKELDTTPMLLDTMQVVQDLLKRIEVLESKLAEK
Physico‐chemical
properties
protein length:458 AA
molecular weight: 49409,10360 Da
isoelectric point:5,67994
aromaticity:0,09825
hydropathy:-0,45590

Domains

Domains [InterPro]
DC_1877
STR
5–458
DC_1877
IPR030392
CHP
353–405
IPR030392
IPR030392
CHP
353–455
IPR030392
XNL96044.1
1 458
Architecture
STR
STR 5-458
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XNL96044.1
1 458
Domain Start End Length (AA) Confidence
N-terminal 1 243 243 0,1364
Central domain 244 442 200 0,0962
C-terminal 443 458 15 0,9968
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-243
Central
244-442
C-terminal
443-458

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage ev_rybdy8
[NCBI] 		3390213 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XNL96044.1 [NCBI]
Genbank nucleotide accession
PQ819471.1 [NCBI]
CDS location
range 67 -> 1443
strand +
CDS
TTGTTATCCCCTATCTCAGATTCTGAATGGCTTAGTGATGCCCAAAAACGTGGACAGTACTCTACTGGTGACGGTTCTACTACTTTCCGCGTTCCAGACCGCAACGGGGTTCAGGTCGGTTCTATTAAGGAGCTATTTGGTCGCGGTGATGGTGGTATATCGTCCAACAATGGTGTTATCTACGATTCTGCTGCACCTAATATCAGAGGTAAGGTCGCTGGTGTATCAGCCGGGACTTATGCAGGGATATTCGGGACGTCTGTGCAGGATTCATTCTATACGGACAACAGTTTGTATCCGGCTGGTGGGGGGGACACTATACCTCCGGGGTCCGGTGCAGTTGATGGACGTAATAATACTCTAGTCTTCGACGCAAGCCAGTCCAACCCAGTTTATGGTCGTTATAGTATCTCTGATAACATTATACCGAGAAACTTCGTAGGTGTTTGGACTATCCGTGCCCATGGTGGATTTACTGCTGCTAATACTTCTTGGAGTGTCATTAACAGTGATAGCGCAGCTCCGGCTTTAAATACTTCTGTGGTTGGTGGTAAGGTAGAATCTAAATATACTAACCCAACCTCTTCCCAATATGCTCGTATGTATATTTCCTCTTCTTGGGGAAGTGTTTGCTCCGCCGTGATTGAAGCACAAGGTGCAAGTACTCACGCTTATAAGTTTTATGAGGATGGCACTGTTGATTTTAGGCAGTCTGGTAAGACAAACCCATTCCGCATGTACACACCAACTGGAATTTGGACTGGACTGACGGATGCGGGGCCAAACAATTTAACCACCAATGGAATGGATAGGGTGGCGATTTCTAGTGGCTCTGACACAGTGGTGCGTGGGTACTCTATTGGAGGATCTAAACCTAATGGTTATCCAACCAAGGTTGGGCATCATATGTATTTGCCGGGAAATGACGCCTTCGGTATCGCCTGTACAACTATTGGAGGAGACAACGGAAGGTTCTGTCGATATTTTTACGACATAGACGGGCAGATGTATGGCTCAACTGATTATGGAAACTTTAGCTATACAAAGAGTGGTGTCTCGGATGAAAACCTGAAACATAACATTGTTGATATTGATGCAGAAAGAGCTATTGAAGTAATAAAAGGACTGAAGTTCAAATCCTTTGTTTACAACGATGATGAGAAGAATCGATCTCGTCGTGGTATCATTGCACAGCAGGCAGAGACGGTAGAACCTCTGTATGTTAAGACTCGCAAATACCCAGGAATGGAGAAAGGCTCTCCAGAAATCGAGCAGAAAGAGCTAGACACTACTCCAATGCTCCTTGACACTATGCAAGTAGTTCAAGATCTTCTGAAGCGTATTGAAGTTCTGGAATCGAAGTTAGCAGAGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b8c36691425ba0b03d2702b0633ebe56effa4587bf1ba2e27d0b23261ee6fd12
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6367
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50