Protein

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Genbank accession
YP_009620279.1 [GenBank]
Protein name
tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MLSNPPSTGDVELDNFLRSVKTHINDALRPADGWRLSDLSADVSEVISDKRDLIDIVTAYNDINILKDSVDLALEDFKATANQYQDHAEVFSHTTEWWDQNRKIIEDASQAMAATILASGYADAAAADRVQTGADREATEAAAARAEQSETNAEESATTASTAAAEATDAMEIASEAALSADDGASRAAESADSASQSQAEAATHAQNASAAADRIGTAEQVGEWVQQAASSASSASASESAAEEAATRAEQHEAGAEAALSTKADVVHTHSIEQVNGLQTALDGKASLVGGLIPTSQLPAVALTKPQVVSNRAGMLALTAQEGDVAVITAGADKGTYMLGPGASTNFASWVALATPTDAVTSVNGQTGVVNLSASNVGAAPSSHTHTSAQISDAGSTATASTVVKRDSSGRAQIADPAAAQDAATKAYVDNLVGTRIASIPTPNIVYGTDTSGNQATYTVKGGAFEWSLAQRGANGTLKVGEPSVDTDAATKKYVDTGLSGKAAASHTHTSAQISDAYGYPGESAAIDRIVKCGTSGWFALRNDPTSPDHPARKAYVDKSIINAPKLHTWNGSGLWVAPANAGPNDLVLNTSTKQIFSVQVV
Physico‐chemical
properties
protein length:603 AA
molecular weight: 61894,70700 Da
isoelectric point:4,61893
aromaticity:0,04478
hydropathy:-0,25672

Domains

Domains [InterPro]
DC_1046
STR
110–459
DC_1046 PF12789
PF12789
STR
261–287
PF12789 DC_1707
YP_009620279.1
1 603
Architecture
STR
STR 110-544 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009620279.1
1 603
Domain Start End Length (AA) Confidence
N-terminal 1 149 149 0,9807
Central domain 150 446 298 0,1809
C-terminal 447 603 156 0,5852
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-149
Central
150-446
C-terminal
447-603

Taxonomy

  Name Taxonomy ID Lineage
Phage Corynebacterium phage Darwin
[NCBI] 		2047869 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009620279.1 [NCBI]
Genbank nucleotide accession
NC_042086 [NCBI]
CDS location
range 17591 -> 19402
strand +
CDS
TTGCTTAGTAATCCACCTTCCACTGGTGATGTAGAACTTGACAATTTTCTTAGGTCTGTTAAAACACATATTAACGATGCCTTGCGTCCTGCGGACGGATGGCGACTTAGCGACCTTTCCGCTGACGTTTCTGAGGTAATCTCAGATAAGCGTGACCTCATCGACATTGTGACAGCGTATAACGACATTAACATTTTGAAGGATTCTGTCGATCTCGCTCTGGAAGACTTCAAAGCGACTGCAAACCAATACCAGGATCACGCGGAGGTTTTCTCTCACACTACGGAGTGGTGGGACCAGAACCGAAAGATTATTGAGGACGCTTCTCAGGCCATGGCTGCGACCATTTTGGCTTCCGGCTACGCTGATGCAGCCGCTGCGGATCGCGTGCAGACTGGAGCTGACCGCGAGGCGACGGAGGCAGCCGCTGCGCGTGCGGAGCAGTCGGAGACTAACGCGGAGGAATCTGCGACGACGGCTTCTACGGCGGCTGCTGAGGCTACGGACGCGATGGAAATTGCCAGCGAAGCAGCATTGTCTGCCGATGATGGGGCAAGCAGAGCCGCTGAATCGGCTGATAGCGCTTCACAGTCTCAGGCTGAGGCAGCTACCCATGCTCAAAACGCTTCTGCAGCGGCGGATCGCATTGGCACTGCGGAGCAGGTCGGGGAGTGGGTACAGCAGGCAGCGTCTTCGGCTTCTAGCGCTTCGGCTTCGGAGTCCGCCGCCGAAGAAGCGGCGACCCGAGCAGAGCAGCACGAGGCAGGGGCAGAAGCGGCGCTATCGACTAAAGCTGACGTGGTTCACACTCATTCGATTGAGCAGGTCAATGGCCTACAGACCGCACTCGATGGTAAAGCCTCACTTGTGGGTGGGCTTATCCCTACATCCCAGCTCCCTGCGGTTGCGCTGACAAAACCGCAAGTGGTGTCGAATCGGGCCGGGATGTTGGCTTTGACGGCGCAGGAGGGTGACGTAGCGGTGATTACCGCGGGGGCGGATAAGGGCACCTACATGCTGGGGCCTGGGGCATCGACGAACTTCGCATCGTGGGTTGCGCTTGCTACCCCGACGGATGCTGTGACGTCGGTGAATGGTCAGACCGGTGTGGTGAATTTGTCGGCATCTAATGTGGGTGCGGCTCCATCATCGCACACGCATACGTCGGCGCAGATCAGTGACGCGGGGTCTACAGCTACGGCTAGCACGGTGGTGAAGCGAGATAGCAGCGGACGCGCACAGATCGCTGACCCTGCCGCCGCCCAAGATGCTGCCACGAAGGCGTATGTTGACAATCTAGTTGGAACGCGAATCGCTTCGATCCCTACACCAAACATCGTGTACGGCACAGATACATCGGGCAATCAAGCTACCTACACCGTCAAGGGCGGTGCGTTTGAGTGGTCGCTTGCTCAGCGAGGTGCTAATGGCACGCTAAAAGTCGGGGAGCCAAGTGTAGACACTGATGCCGCAACGAAGAAGTACGTGGATACCGGATTGTCTGGGAAGGCGGCCGCATCTCACACGCATACGTCGGCGCAGATCAGTGACGCATACGGATACCCGGGCGAGTCGGCAGCGATTGATCGTATTGTGAAGTGCGGCACGTCTGGCTGGTTTGCACTTAGAAATGACCCTACTAGCCCTGATCATCCTGCCCGTAAGGCCTATGTTGACAAATCAATCATCAATGCCCCGAAGCTTCACACATGGAACGGCAGCGGGTTGTGGGTAGCCCCGGCGAATGCTGGCCCAAATGACCTCGTGCTTAACACGTCCACGAAGCAAATTTTCTCAGTACAGGTGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5109fb64c4db424c2de4554875eb6bc16928ef21a36262f438b5d1842f06627a
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6654
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50