Protein

View in Explore
Genbank accession
AUR88445.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MGFFMSDINFCNTKEQLNHLGEVVTGKVDGSPTGADIDTSTLPYTGQVRKTLPALEAEYQADIDNFVQVSDQLIVDKTDEFDTSIANKESEADAAIDAYRLLSKGPYAAGIELEDKFQYITYNGESYFATNPPYTTTATTPDNDGNLFISGYTTFENVANKIGNKNELSNSNFLTPSPDSITHPNATPESYVAGTQIFNGVYAGDSGCTITFIDGRVNCTAGDYKFKLPNTGGLERVPAFTSSVSDYDGIPKTTGVSHALASGEYVVTVTPAAGDVFSVKLEQGSVATWHEATSYNSQLLQVAIANNVSFDQVALLALGVVSGIHYFWDANTQTTFRPSSPISGTITSVGSVGVTVDIVVDGNTITLYKLVKNSYLARAAGLDYQGYWSEGLTIPADSRVDNKAWWQDEIGSFVIPKSDLSFVTGATWDLDSDNWSLEPIMTLRQHWLEGGDVQAFGAIPDYYLPDGSVNPSPTDNREAIQACFDDCVDKNISMTLIGDYYYTGGLTISSRQDESNRRILNAQGALHVNLDGTGFTQALYVGDSSANGTYPLIIDGFLRIINAGTPYVGTGFEAENAAYGDYSVICSGWDIGAYNNGSIFTKYNGRGYLYSDNNLDFKITSNENPGGLRFASNLVTLEDMILNSCQKLEVNTISGLPPLSDTSGGLIRLKRVNFEGQSGVANDAVPMIQIRNAGEVVVAQVMDFIEFDNCWFEAFNANKITINQTKSKIALNNCFFARGANNDFIVHNDDKCFTSFNKTSIYLADQQPASGCIVSRNGSATDAYRSNIESINSVMYGSTGVLFPLHDGLPSDHMILSSSSSKRQVSVQLNSTYPATAVDDYMTNVEINLFNIITDFVGAGWISAEITMHSGTGASYAYSKIVATKQGAAIIYTTDNDLTLSDGRWNLKFPVVQKADFFKPQFTIDSIVNINNYPLP
Physico‐chemical
properties
protein length:936 AA
molecular weight: 101558,40440 Da
isoelectric point:4,43568
aromaticity:0,10684
hydropathy:-0,17778

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR88445.1
1 936
Domain Start End Length (AA) Confidence
N-terminal 1 204 204 0,8162
Central domain 205 803 600 0,6015
C-terminal 804 936 132 0,9699
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-204
Central
205-803
C-terminal
804-936

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.113.A._10N.286.51.E7
[NCBI] 		1881426 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR88445.1 [NCBI]
Genbank nucleotide accession
MG592487.1 [NCBI]
CDS location
range 23205 -> 26015
strand +
CDS
ATGGGCTTTTTTATGTCTGATATAAATTTTTGTAACACGAAAGAACAACTAAACCATTTAGGCGAAGTTGTCACAGGTAAAGTTGACGGCTCACCGACGGGCGCTGATATCGATACATCTACACTTCCTTATACTGGTCAGGTGCGTAAGACGCTGCCTGCGCTTGAGGCGGAGTACCAAGCTGACATTGACAACTTCGTTCAAGTGTCAGACCAATTAATTGTTGATAAGACGGATGAATTCGACACGTCTATCGCAAACAAAGAATCCGAAGCGGATGCTGCTATTGATGCTTATCGATTATTAAGCAAGGGGCCTTACGCCGCGGGAATAGAGTTAGAGGATAAGTTCCAGTACATTACATATAACGGCGAATCTTACTTTGCAACCAACCCGCCATATACAACAACTGCGACCACTCCAGATAATGACGGCAATTTGTTTATTAGTGGTTACACCACTTTTGAAAACGTAGCAAACAAAATAGGCAACAAAAACGAGCTATCCAACTCAAACTTCCTTACACCATCACCGGACAGCATCACGCACCCTAACGCAACGCCTGAATCATACGTAGCAGGCACTCAGATTTTTAACGGTGTATATGCAGGTGATAGCGGTTGTACGATTACTTTCATTGATGGGCGCGTTAACTGTACTGCGGGTGATTATAAATTTAAGTTGCCTAACACTGGCGGTCTTGAGCGCGTTCCTGCGTTTACATCAAGCGTGTCTGATTATGATGGAATCCCAAAAACCACAGGCGTTAGTCATGCCCTAGCTTCTGGCGAGTACGTGGTAACTGTTACACCTGCTGCTGGTGATGTGTTTAGCGTCAAGCTTGAACAGGGGAGCGTGGCGACTTGGCATGAGGCTACATCTTATAACTCTCAACTTCTTCAGGTTGCAATCGCTAACAACGTTTCATTTGATCAAGTCGCATTGCTAGCACTCGGTGTGGTGTCAGGCATTCACTACTTTTGGGACGCTAACACACAGACTACTTTTAGGCCAAGCTCACCAATAAGCGGTACGATTACTAGCGTTGGTTCGGTTGGCGTTACGGTGGATATCGTTGTTGATGGAAACACAATTACCTTGTACAAGCTAGTTAAAAATAGCTACTTAGCCCGCGCGGCGGGTCTTGATTACCAGGGTTACTGGTCAGAGGGATTGACGATTCCAGCTGATTCACGCGTTGATAACAAGGCGTGGTGGCAGGATGAGATCGGGAGTTTTGTAATTCCAAAAAGCGACTTGTCATTTGTTACAGGTGCTACGTGGGATTTAGATTCAGATAACTGGTCGTTAGAACCCATCATGACGCTACGTCAGCACTGGCTTGAAGGGGGTGACGTCCAAGCATTTGGGGCTATTCCGGATTATTATCTACCTGACGGCTCCGTAAACCCATCACCAACAGATAACAGAGAGGCAATACAGGCCTGCTTTGATGATTGCGTTGATAAAAATATATCAATGACACTAATAGGCGACTATTACTACACAGGCGGCCTAACCATATCATCCCGTCAAGACGAGAGTAATCGACGTATATTAAATGCTCAGGGCGCGCTACATGTGAATCTAGATGGAACTGGATTCACACAGGCTCTTTACGTTGGAGATAGCTCAGCTAATGGAACATACCCTTTAATTATTGATGGTTTTTTACGAATCATCAATGCGGGGACTCCGTATGTCGGAACCGGATTTGAGGCCGAAAACGCGGCGTACGGTGATTACTCTGTTATTTGTTCTGGTTGGGATATTGGAGCATATAACAATGGTTCGATTTTTACAAAATATAATGGCAGAGGATATTTGTATTCAGATAACAATCTGGATTTTAAAATAACATCTAACGAAAACCCAGGCGGCCTTAGGTTTGCGTCTAACCTAGTAACACTAGAAGACATGATTTTAAACTCATGCCAAAAGTTGGAGGTAAATACCATATCCGGATTGCCACCACTATCTGATACAAGCGGTGGGTTGATAAGGCTCAAGCGCGTTAACTTTGAAGGTCAGAGCGGGGTTGCTAACGACGCCGTACCGATGATCCAAATCCGAAATGCCGGAGAGGTTGTTGTTGCTCAGGTAATGGATTTTATTGAGTTTGATAACTGCTGGTTTGAAGCGTTTAACGCCAATAAAATTACAATAAACCAGACAAAGTCAAAAATAGCACTAAACAACTGCTTCTTTGCTCGAGGTGCTAACAATGATTTCATCGTACATAATGATGATAAGTGTTTTACATCGTTCAACAAAACATCTATTTATTTAGCCGATCAACAGCCAGCGTCTGGATGTATAGTATCTAGAAATGGCTCAGCCACTGACGCGTACCGTTCAAACATCGAGTCAATAAATAGTGTGATGTATGGTAGCACGGGAGTTCTTTTCCCTTTGCACGATGGGCTGCCATCTGATCACATGATTTTGTCGTCATCATCTAGTAAGAGACAAGTGTCTGTACAACTAAATAGCACTTATCCTGCAACAGCCGTTGATGATTATATGACAAACGTCGAGATAAATTTATTCAATATAATTACTGACTTTGTCGGAGCAGGGTGGATTTCAGCAGAAATTACGATGCATTCCGGCACAGGTGCAAGCTACGCATACTCTAAAATAGTAGCAACAAAACAGGGTGCGGCAATAATATACACAACAGATAATGATTTAACATTGAGTGATGGTAGGTGGAATCTTAAATTCCCAGTGGTTCAGAAGGCTGATTTTTTCAAACCTCAATTTACAATTGATTCGATAGTTAACATTAATAACTACCCGTTGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d20661389b14132e5fbb0ed9d8d1615936ca1e54e3c0d6bd182286ed1bc004c0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5852
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank