Protein

View in Explore
Genbank accession
YP_010106883.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,80
Protein sequence
MATYRTILTRRGKELIAAAAAIGTPVVLTNMAVGDGNGNPVVPNEGQTLLARERYRGALNTLVVDATDPTRFIAELIVPAATGGFTMREAGIYTAAGELFAVANTPNTYKPTESEGSFGDTIIRMVFAVSNASVVTLVVDPNIAVATQLWVKNNVNAASIIPGGLTNQILAKKSNADGDTVWRDATEGVTVIVFSREETQTLSAGQTVIDLALITAEGAAVYIEGTRLRADQFRKTGAAQITLSTARTAGAKVTIVQNEEVGMTDMLLRPNNLADVPDKAAARINLGLPNWLAVSRIGWAQLDNIPSYGVRWPTFAEVSNKPVAYPPLAHQHAWSDIVNPPDYATRWATWDEISNKPMLFPPAAHTHAEYIPFIGGGTVRNGLLAVSRPASGSVDNSRFFSMEEDGATGDARRLDIALLTGSGVLNREILFRAIQTAQFTFNVPVARFTGNISAVGNGSFDGMLNVSGNSGFGGQVTVGGSISSLSSITAGTFINVGGALNSTRPPSTAIDISRAFSILEDGISSVDARRFDLALLPGTAANAREILFRSIQTAQFTFQVATARFTGTISGGGDAVITGRITAGGSAGITGTITCGSSITSNENGIFSNGASSGYSLVERTDFNIKWSNYASAGAFRIWNNVNQDVVTVTRAGAMNVTGSVTAGGGFDFGSSRKLKDIEGSNPYGLDAVRKVSTLVGKYKPEYNSDGRRRVFVDAEQLAGIIPEAVNNNGVKFRGEMVPSVILDQLIPPAYKAIAELADIIDGLREEIRALKGGR
Physico‐chemical
properties
protein length:775 AA
molecular weight: 81812,26360 Da
isoelectric point:6,03303
aromaticity:0,07355
hydropathy:0,01019

Domains

Domains [InterPro]
IPR022225
ATT
1–148
IPR022225 DC_0440
DC_1371
STR
1–365
DC_1371 IPR030392
IPR051934
Unmapped
2–159
IPR051934
YP_010106883.1
1 775
Architecture
ATT
STR
RBD
ATT 1-148 | STR 149-365 | RBD 407-775
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Xanthomonas phage FoX5
[NCBI] 		2723901 Uroviricota > Caudoviricetes > Foxunavirus >
Host Xanthomonas campestris pv. campestris
[NCBI] 		340 Bacteria > Proteobacteria > Gammaproteobacteria > Xanthomonadales > Xanthomonadaceae > Xanthomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010106883.1 [NCBI]
Genbank nucleotide accession
NC_055838 [NCBI]
CDS location
range 12538 -> 14865
strand +
CDS
ATGGCTACCTATCGCACCATCCTGACACGTCGCGGCAAAGAGCTTATCGCGGCCGCCGCAGCCATCGGCACTCCCGTTGTCCTGACAAACATGGCGGTAGGCGATGGCAATGGAAACCCGGTTGTTCCGAATGAGGGGCAGACATTGCTGGCGCGCGAACGCTACAGGGGGGCATTGAATACCCTTGTTGTTGACGCGACAGACCCGACCAGGTTCATTGCTGAACTGATTGTTCCCGCCGCGACTGGCGGCTTCACCATGCGTGAAGCTGGCATCTACACTGCGGCTGGCGAGTTGTTCGCGGTAGCCAATACGCCAAACACGTATAAGCCAACAGAATCCGAAGGTTCTTTCGGCGATACGATCATTCGAATGGTTTTTGCCGTATCGAATGCCAGCGTTGTCACCCTTGTGGTCGATCCGAATATTGCCGTTGCTACGCAGCTATGGGTGAAGAATAACGTCAATGCGGCATCCATCATTCCTGGCGGCCTGACAAATCAGATTCTTGCAAAGAAGTCAAACGCGGACGGTGATACCGTTTGGCGGGACGCGACCGAGGGTGTGACCGTAATTGTGTTTTCGCGGGAAGAAACGCAGACGCTTTCCGCCGGCCAGACGGTAATCGACCTGGCTTTGATTACGGCTGAGGGCGCTGCTGTTTATATCGAAGGAACCCGTCTTCGCGCTGACCAGTTCAGAAAAACCGGCGCGGCTCAGATCACACTTTCTACGGCGCGGACAGCCGGGGCAAAAGTCACAATCGTTCAAAACGAAGAGGTCGGGATGACCGACATGCTTCTTCGGCCAAACAATCTCGCTGATGTGCCTGACAAGGCGGCCGCTCGAATTAATCTTGGGCTTCCCAATTGGCTTGCGGTTTCTCGCATCGGATGGGCGCAGTTAGACAACATCCCATCGTACGGCGTGCGCTGGCCGACATTCGCGGAAGTGTCGAACAAGCCGGTCGCATATCCGCCGCTGGCCCACCAGCATGCATGGTCGGATATCGTGAACCCGCCTGACTATGCCACTAGGTGGGCGACCTGGGATGAAATTTCGAACAAACCGATGCTCTTCCCCCCGGCGGCGCACACCCATGCCGAATACATACCGTTCATCGGCGGCGGAACCGTGCGTAATGGATTGCTCGCCGTTTCGCGACCAGCGTCCGGCTCCGTTGATAATTCGCGGTTCTTCAGCATGGAAGAAGATGGCGCAACCGGTGATGCTCGTCGGCTTGATATTGCATTGCTGACTGGCTCGGGCGTCCTAAACCGTGAAATTCTTTTCCGCGCTATCCAAACCGCCCAGTTCACTTTCAATGTACCGGTGGCGCGCTTCACCGGTAACATCTCGGCCGTTGGCAACGGCTCGTTCGACGGCATGTTGAACGTTTCCGGCAATTCCGGCTTCGGTGGGCAGGTGACGGTCGGCGGTTCGATCTCGTCTCTGAGTTCGATCACCGCCGGAACTTTCATCAACGTGGGCGGCGCCCTGAACTCCACGCGGCCGCCATCCACAGCGATCGATATCTCGCGCGCTTTCAGCATCTTGGAAGACGGCATTTCATCTGTCGATGCTCGGCGCTTCGATTTGGCGCTACTGCCCGGCACCGCGGCGAATGCGCGCGAGATCCTGTTTCGGTCCATCCAGACCGCGCAGTTCACGTTTCAGGTTGCGACAGCGAGGTTCACTGGGACGATTTCAGGGGGCGGTGACGCGGTCATTACTGGCCGAATCACCGCTGGCGGCAGCGCTGGCATCACTGGCACAATAACGTGCGGCAGTTCAATCACTTCCAACGAAAACGGAATTTTCAGCAACGGGGCCAGTTCGGGTTATTCGCTTGTCGAGCGAACAGATTTCAACATCAAGTGGTCAAATTACGCCAGCGCGGGCGCCTTCCGTATTTGGAATAACGTAAATCAGGACGTGGTGACCGTGACGCGCGCAGGCGCCATGAATGTCACCGGCTCCGTGACTGCTGGCGGCGGTTTCGATTTCGGTTCATCCCGGAAGCTGAAAGACATCGAGGGGTCGAACCCGTACGGATTGGATGCTGTGCGCAAAGTTTCCACCCTGGTTGGCAAGTACAAGCCGGAATATAACAGCGACGGCCGCAGGCGTGTATTCGTGGACGCTGAGCAGCTTGCGGGAATCATTCCCGAGGCCGTGAACAATAACGGCGTTAAGTTCCGTGGCGAAATGGTTCCTTCGGTTATTCTGGATCAGCTAATTCCGCCGGCCTATAAGGCGATTGCTGAGCTAGCCGATATAATCGATGGTCTGCGCGAAGAGATTCGCGCACTGAAGGGGGGCCGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ea1c436c2e3c447da5659a50bc39c76854c8957da9247324de8fa88ab0360fb9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6573
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Development of an integrated pest management strategy to control Xanthomonas campestris pv. campestris by using bacteriophages Holtappels,D., Lavigne,R. and Wagemans,J. 2022-01-27 — GenBank