Protein

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Genbank accession
AVR76010.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MNLVEYYETVEKSVDLSFNLAARYLPVVYGTQFVGGIPIFADTDKNNPNTVWVVYAVCEGEIEGFLDIHIDDKPLICIDDKDDEGRVCFGRKRVNGDTMNKLAVDATGNPVAGASGPSVHGQSYILKDDDGTIQFWVYHGLKNQTASSVLVSKAQRGEFYLQSLNNIGPEYWDSNFRLLDT
Physico‐chemical
properties
protein length:181 AA
molecular weight: 20137,27060 Da
isoelectric point:4,55379
aromaticity:0,11050
hydropathy:-0,25691

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage AhSzq-1
[NCBI] 		2138298 Uroviricota > Caudoviricetes > Demerecviridae > Shenzhenvirus AhSzq1 >
Host Aeromonas hydrophila
[NCBI] 		644 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AVR76010.1 [NCBI]
Genbank nucleotide accession
MG676224.1 [NCBI]
CDS location
range 85313 -> 85858
strand -
CDS
ATGAACTTAGTGGAATACTACGAAACTGTAGAAAAATCTGTGGATCTCTCTTTCAACCTAGCTGCAAGGTACCTGCCAGTAGTTTATGGGACCCAATTTGTGGGTGGTATCCCTATTTTTGCAGACACTGATAAAAATAACCCCAACACTGTATGGGTTGTGTATGCTGTATGTGAGGGTGAGATTGAAGGTTTCTTAGATATCCATATAGACGATAAGCCTCTCATCTGTATTGACGACAAGGATGATGAAGGTAGGGTGTGCTTCGGTCGCAAAAGGGTGAATGGAGACACTATGAATAAGTTGGCAGTAGATGCTACCGGAAACCCTGTAGCAGGGGCTTCTGGGCCTAGTGTCCACGGTCAGTCATATATATTGAAAGATGACGATGGCACTATTCAATTTTGGGTTTATCATGGTCTTAAAAACCAGACTGCCTCAAGTGTCTTAGTGTCTAAGGCTCAGAGGGGAGAATTCTACCTACAATCCCTCAACAATATTGGCCCGGAATACTGGGACAGTAATTTCAGACTTTTAGATACGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
876a168df0b05bc044ae015f7fd1912d33a8ab9b8d36ac195aac0379f481740d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3218
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of T5-related Aeromonas hydrophila phages AhSzq-1 and AhSzw-1 and proposal to be two new species Chen,L., Yuan,S. and Ma,Y. 2018-03-19 — GenBank