Protein

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Genbank accession
XYM58788.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
Protein sequence
MSRILADKVTNYNNDGPFMAEQGVEFPIGKPLVVAGSAGASGNYLASTGAGLAWQIFPELFSGDYNDLENRPILFSGDYDDLNNKPSLLPFEVLIPVSNQILLYNDTTQRWENGDLPAIYTYTLFEEAGSNSETAYIKLQDNFGLETYIRLVGGNGITFDAADGDISIISPTVVEYDANTAKDDVSYMFRDGSHSGITFTWDEVNKTFDASVALAEQLVYTFEAEDVDDGSGGIEPDQVNLKLTTDTTTNGNVKFIGSNGINLDWNIGLSELTISKTDPPEYVLPIATDAVLGGVRVDNTSIVADASGVLSANIDISNKIEFSSLSVVNQAASGVGDLSYDDTTGRFDFTPPAPSLNSLTDVNLSETIQNSEIIQWNGNNWTNVSVSNVYPDLDGLTDVDVSTATSGQYLYFDGTSWRGEGIDLNSASIHTLNDVSGLAANNVDGMFLKWDSATSSWAPTNVIIQDFDVVGAPADGDTLLWDELNNYWTVGSPGGGGSSVTQLNDLSDVDAPAVNNGDILVFNGSVFAPASPGAASLPSRSTRSVSNNGIMGTGDSEDLTISGFPGYNLYKINVNQAAWVTVYCDETSRTADASRPESQDPTPGSGVIAEAVTTGSGDVLFTPAVVGFNNQDPVVGNIYIKVVNKGGSINGGDLTVTLTLLPTEV
Physico‐chemical
properties
protein length:665 AA
molecular weight: 70532,32960 Da
isoelectric point:4,05003
aromaticity:0,08872
hydropathy:-0,13729

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYM58788.1
1 665
Domain Start End Length (AA) Confidence
N-terminal 1 534 534 0,9916
Central domain 535 654 121 0,0034
C-terminal 655 665 10 0,9865
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-534
Central
535-654
C-terminal
655-665

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage Sf-FR1
[NCBI] 		3413218 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM58788.1 [NCBI]
Genbank nucleotide accession
PV340855.1 [NCBI]
CDS location
range 169830 -> 171827
strand +
CDS
ATGTCTAGAATTCTTGCGGATAAGGTAACCAATTATAATAATGATGGTCCGTTTATGGCGGAGCAAGGAGTCGAGTTTCCTATTGGAAAACCTCTTGTTGTTGCTGGTAGTGCTGGTGCTAGTGGAAACTATCTGGCAAGCACAGGTGCTGGTCTCGCTTGGCAGATTTTTCCAGAACTATTCTCTGGAGACTATAACGATTTAGAAAACAGACCAATTCTTTTCTCTGGCGATTACGACGATTTAAACAACAAACCTTCGCTTCTTCCCTTTGAAGTTTTAATTCCAGTATCAAATCAAATTCTCCTATACAACGATACAACACAGCGTTGGGAGAATGGTGATCTCCCTGCAATATACACTTACACTCTCTTTGAAGAGGCTGGTAGTAATAGTGAAACTGCCTACATTAAACTCCAAGATAATTTTGGATTGGAAACTTATATAAGACTTGTTGGTGGTAATGGAATTACATTTGATGCTGCTGATGGAGACATCTCAATCATTTCTCCTACGGTAGTTGAATATGATGCAAATACAGCTAAGGATGATGTCTCTTATATGTTTAGAGACGGTAGTCATAGTGGCATTACTTTTACGTGGGATGAGGTTAATAAAACTTTTGATGCATCAGTTGCACTTGCAGAGCAACTAGTATATACATTTGAGGCAGAGGATGTTGATGATGGCAGTGGCGGCATTGAACCAGACCAAGTTAATTTAAAATTAACTACAGACACTACTACGAATGGCAATGTAAAATTTATAGGATCCAATGGCATTAACCTTGATTGGAATATTGGATTGTCAGAACTTACTATTAGCAAGACTGATCCTCCTGAATACGTTCTTCCCATTGCAACCGATGCAGTTCTTGGTGGTGTGAGAGTAGACAACACTAGTATTGTAGCTGATGCTTCTGGTGTTCTTTCCGCAAACATTGACATCTCAAATAAAATTGAATTCTCAAGTTTGAGTGTAGTTAATCAGGCAGCAAGTGGTGTTGGAGATTTATCTTATGATGATACTACTGGTAGATTTGATTTCACACCTCCAGCACCCAGTCTTAATAGTTTAACTGACGTTAATCTATCTGAAACTATACAAAATTCCGAGATTATTCAATGGAATGGAAATAATTGGACAAATGTTTCTGTATCAAATGTTTATCCTGATCTGGATGGTCTAACTGATGTTGATGTTTCTACTGCAACATCAGGGCAGTATCTATATTTTGATGGAACTTCTTGGAGAGGTGAAGGAATTGATCTTAATTCTGCATCTATCCATACATTGAATGATGTTTCTGGACTTGCTGCGAATAATGTAGATGGGATGTTCTTGAAATGGGATTCTGCCACATCTAGTTGGGCTCCAACTAATGTTATTATTCAAGATTTCGACGTTGTAGGTGCTCCTGCTGATGGAGACACTCTCCTTTGGGATGAACTTAATAATTATTGGACTGTTGGTTCTCCTGGCGGTGGTGGATCTAGTGTAACTCAGTTAAATGATTTGTCTGATGTTGATGCTCCTGCGGTAAATAATGGAGACATCCTTGTATTTAATGGTAGTGTGTTTGCTCCAGCATCTCCAGGTGCTGCATCACTACCAAGTAGATCAACTAGATCTGTTTCTAATAATGGTATTATGGGTACTGGTGATTCGGAAGATCTTACTATAAGTGGATTTCCTGGATACAATCTTTACAAGATCAATGTTAACCAAGCTGCTTGGGTTACTGTGTATTGTGATGAGACATCTAGAACTGCAGACGCAAGTAGACCTGAATCTCAGGACCCCACACCAGGATCTGGTGTAATTGCTGAAGCAGTTACCACTGGTTCTGGTGATGTTTTATTCACCCCTGCTGTAGTTGGATTTAATAATCAAGATCCAGTAGTTGGTAATATTTACATTAAGGTTGTTAATAAAGGTGGTAGTATTAATGGTGGCGATCTCACCGTTACCTTAACTCTTCTCCCAACAGAGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
26de3e0d82c70ef1617de4af9b5f21b39af4cde991316bd1b676cbdd8ae97840
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6927
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50