Protein

View in Explore
Genbank accession
WWO60422.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MIPAPVSGIDPSTYVLPSRRFTAPLVDYAMGSSAVGLSAKRNTLWTSSYDGANIQATPEGGSAVTLLTVPNVTRVAFDFDQLMRPVVGYQTGGSSAFLWWYDSSVGSMVTVEYAGYKDICVNLDVWETESQALSDVLVSAVKNSSQVVCRVQRERMLTEHVLLSGLVAESKLLNVGMANNRRLQWKVYPKL
Physico‐chemical
properties
protein length:191 AA
molecular weight: 20858,58940 Da
isoelectric point:6,57163
aromaticity:0,08901
hydropathy:0,05236

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage SB5
[NCBI] 		3117469 No lineage information
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WWO60422.1 [NCBI]
Genbank nucleotide accession
PP079417.1 [NCBI]
CDS location
range 38478 -> 39053
strand +
CDS
ATGATCCCGGCTCCGGTGTCAGGTATTGATCCGAGCACCTACGTTCTACCGAGTCGGCGCTTCACCGCGCCGCTCGTGGATTACGCCATGGGTTCCTCGGCCGTTGGACTTAGTGCCAAGCGAAACACCCTGTGGACCAGCAGCTACGACGGAGCCAACATCCAAGCGACGCCGGAGGGCGGCTCTGCTGTGACCTTACTCACTGTCCCGAATGTCACCCGTGTGGCTTTCGACTTCGACCAGCTGATGCGCCCTGTTGTGGGCTACCAGACTGGCGGGTCGTCGGCGTTCCTGTGGTGGTATGACTCCTCGGTTGGTAGCATGGTCACGGTAGAGTACGCGGGATACAAGGACATCTGCGTCAACCTCGATGTGTGGGAGACTGAATCGCAGGCACTGTCCGACGTACTCGTGAGTGCTGTGAAGAACAGCAGCCAAGTGGTGTGCCGCGTGCAGCGCGAGCGCATGCTCACCGAGCACGTGCTCCTCTCGGGGTTGGTTGCAGAAAGCAAGCTGCTCAACGTAGGAATGGCAAACAACCGCCGCCTTCAGTGGAAGGTGTATCCAAAACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
239199ce14f490b293320a0ab0ac81a28ec4e9d6207d15619f0b849c4af4a596
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6922
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel lytic viruses for Xanthomonas sp. and Stenotrophomonas maltophilia Petrzik,K., Brazdova,S., Sovova,L. and Neoralova,M. 2023-07-17 — GenBank