Protein

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Genbank accession
YP_009605486.1 [GenBank]
Protein name
putative virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MNTPILTKYKFDPTGKDPENLIGGERHTVAAGPKNKIIAVFEGPFFSASAKVRLLDGSYLEPWVDFQPVHHFPEASKRTGKSCTCFIKILNESVNGDVFIEYQVVGGEFTFNSITLENLLWAIINDERSVLWDNINNRPATYPPSYHTHDIFNDTYGWDDRIAFSNWISDYLILGGERLNYEGFTNKVNVVLDEITTIQANILAQVAEHEADHTNPHADTAKTLGYNKLQNLATANEVQALEGQRTDLRLTVKTAESILADAVKGYSVNLIHQGIIPVSRFGNLNFLQPGIIGSFEGASMVEAEDHYAQNVENDGTYIRLRPGTNGESIALYYDYVTNIHNNINTFTVTNTNNKYTPASLDQAYIPARLFDCQGDVIAGIMYNKAALPSTADYKYWVALTNGTLDSTKHNCAVINNAYFTMDDGTTQDFRTAWTQFCLIGSRIYIIHQNPNIATTMEAGGSISVNAIPQFYLGYINVADVVAGGPVNVTQLTGWATTLLGQTRTAARSMQICDQVIGRSNQHVLVRYDGNQYVKAQYRSWPGGYGKLVANTDGTLTMLVDFTLNVDGRNNSNISMFPIRFIVDLNAKTVRSPETMNPFVIIDAPNSNLTMTVNTNGSNLNMFKLRGVNDGGTALTGDYHGSRMITKKGYSICTHRQQSTNLGLRVDVQQIPNFTNIDAYWRNPAGYSNVLYRSVGDDTSYGSEAKGNLRCPILFPNNRLGFYTLDSSGTHFVSQPLIGNGDFVYKLIGLGTVQGFQPSNDRVKAVIKYPTREIITEINGGSVVTHCRSISDDAPAGPANIDYLLNESGSISTDVNYLRSQGQRVLTQLGITAAKFRCILFVPTDGGMSLMLKVVGYTPPQANGITNTITAIATVTYGGARDGVLVGWTANVDDIISKPEVVGTSDISRIQTTFGLLTYKVGNEYIVAMGGFYCPYTVGPANNLPLVYLKMTNGRIAGNPSNQYFVSPYVDLLSNTPFALPGKGLFVTYSDGNYTTPVTPDAAAAVGPCAIVVAGQGEDFEKVRQWTIPGNSTMVLLSQTVEQGWILYFAEEIPVILNGREYALPITSIDLRNVKANPASTTFFVYIEAVDATTAKYTISATELAAATTRMFIGTVATNTSQINTINVTKRSGLNKYQISAVKAGSSIPVSTGLPFQRGNWSQE
Physico‐chemical
properties
protein length:1163 AA
molecular weight: 127242,85920 Da
isoelectric point:5,77617
aromaticity:0,09888
hydropathy:-0,14678

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009605486.1
1 1163
Domain Start End Length (AA) Confidence
N-terminal 1 279 279 0,9928
Central domain 280 478 200 0,6028
C-terminal 479 1163 684 0,5532
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-279
Central
280-478
C-terminal
479-1163

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage vB_EamM_RAY
[NCBI] 		1815987 Uroviricota > Caudoviricetes > Chimalliviridae > Agricanvirus ray >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009605486.1 [NCBI]
Genbank nucleotide accession
NC_041973 [NCBI]
CDS location
range 20549 -> 24040
strand +
CDS
ATGAACACCCCGATTTTAACGAAGTATAAATTTGACCCCACGGGGAAAGATCCCGAGAACCTGATTGGTGGCGAACGCCACACTGTTGCGGCGGGCCCAAAGAACAAAATCATCGCCGTGTTTGAAGGTCCCTTTTTCTCAGCCAGTGCCAAAGTGCGCTTGCTTGACGGCAGCTACCTGGAACCCTGGGTAGACTTCCAACCCGTGCACCATTTCCCTGAAGCCTCCAAACGCACCGGGAAGTCCTGTACGTGCTTTATCAAGATCCTCAATGAATCGGTCAATGGGGATGTCTTTATTGAGTACCAGGTGGTGGGGGGTGAGTTCACCTTCAACAGTATCACGCTTGAGAACCTGTTATGGGCGATCATTAATGATGAGCGTTCGGTCCTGTGGGATAACATCAACAACCGTCCCGCTACGTACCCGCCATCGTATCACACCCATGATATCTTCAATGACACGTATGGCTGGGATGATCGTATCGCTTTCAGTAACTGGATCTCGGATTACCTGATCCTCGGTGGCGAGCGCTTGAACTACGAAGGCTTTACCAACAAGGTCAATGTGGTACTGGATGAGATCACCACCATTCAGGCGAACATCTTAGCCCAAGTTGCTGAGCATGAAGCCGATCACACCAATCCGCATGCCGATACGGCAAAGACCTTGGGTTACAACAAACTGCAGAACCTGGCCACCGCGAACGAAGTGCAGGCGCTGGAAGGGCAACGTACCGATCTGCGTCTTACCGTGAAGACGGCTGAAAGCATTCTGGCGGATGCAGTAAAAGGCTATTCGGTCAACCTGATTCACCAGGGGATTATTCCGGTCAGTCGCTTTGGTAACCTGAACTTCTTACAACCAGGGATCATCGGGTCGTTTGAAGGGGCGTCGATGGTTGAAGCAGAAGATCACTACGCCCAGAACGTTGAGAATGACGGCACATACATTCGTTTACGTCCAGGGACCAACGGTGAATCTATTGCGTTGTATTACGACTATGTCACCAACATCCACAACAACATTAATACATTCACCGTCACCAACACCAATAACAAATACACACCTGCCAGTTTGGATCAGGCGTATATTCCGGCGCGCTTATTTGACTGTCAAGGTGATGTAATTGCCGGGATCATGTACAACAAGGCCGCATTGCCGAGCACTGCTGATTATAAGTACTGGGTGGCGCTGACCAACGGCACACTGGACAGCACCAAACATAACTGCGCGGTTATCAACAATGCCTATTTTACCATGGATGACGGCACAACCCAAGACTTTCGTACCGCCTGGACCCAGTTTTGTTTGATAGGTTCTCGGATTTACATCATCCATCAGAATCCAAACATCGCTACTACGATGGAGGCCGGTGGTTCAATCTCTGTCAACGCAATTCCCCAATTCTATCTCGGGTATATTAACGTTGCCGATGTAGTGGCCGGCGGTCCGGTGAATGTGACTCAACTTACGGGTTGGGCAACAACGCTGTTAGGTCAGACCCGTACAGCAGCTCGCAGTATGCAAATCTGTGATCAGGTGATTGGTCGCTCTAATCAGCACGTTCTGGTGCGTTATGACGGAAATCAATACGTCAAAGCACAATACCGCTCATGGCCAGGTGGTTATGGTAAATTGGTTGCCAACACCGACGGTACGTTAACCATGTTGGTTGACTTCACCCTCAACGTTGATGGTCGCAACAATTCCAACATCTCAATGTTCCCAATCCGTTTCATTGTGGACTTAAATGCCAAGACTGTGCGGTCACCCGAAACGATGAACCCGTTTGTGATTATCGACGCCCCTAACAGTAACCTGACCATGACGGTGAATACCAACGGGTCTAACCTGAACATGTTCAAACTACGCGGGGTAAATGATGGCGGGACGGCACTGACCGGTGATTACCACGGCAGTCGGATGATCACGAAGAAAGGGTATTCAATCTGCACCCATCGCCAACAATCCACCAACCTCGGTTTGCGGGTTGATGTCCAACAGATCCCGAACTTTACGAACATCGATGCCTACTGGCGCAATCCAGCCGGGTACAGTAATGTACTGTATCGTTCAGTAGGAGATGACACCTCCTACGGTTCTGAGGCCAAAGGTAACTTACGCTGCCCAATCCTCTTCCCGAACAACCGTTTAGGTTTCTACACTCTGGACTCTAGCGGTACGCATTTTGTGTCACAGCCGCTCATTGGCAATGGTGATTTCGTTTATAAACTGATCGGACTTGGAACAGTGCAGGGTTTCCAGCCCTCGAACGACCGTGTGAAGGCTGTGATTAAGTACCCTACCCGTGAGATCATCACTGAGATCAACGGCGGGTCTGTGGTCACACATTGCCGTTCAATCTCTGACGATGCACCCGCGGGACCAGCTAACATTGATTACTTGCTCAATGAATCGGGTAGTATCAGTACCGATGTGAACTATCTGCGGTCGCAGGGTCAGCGTGTGTTAACTCAACTCGGTATTACGGCAGCTAAGTTCAGATGTATTTTGTTTGTACCGACCGATGGCGGGATGTCATTGATGTTGAAGGTTGTGGGGTATACTCCCCCGCAAGCTAACGGCATTACTAACACCATCACTGCAATCGCAACTGTGACGTATGGCGGTGCACGTGATGGTGTGTTAGTTGGCTGGACTGCCAATGTGGATGATATCATTAGCAAACCGGAAGTGGTCGGTACGTCAGATATCTCCCGCATCCAAACGACTTTTGGTTTATTGACATATAAGGTAGGGAATGAATACATCGTTGCGATGGGTGGGTTCTATTGCCCTTACACAGTAGGTCCGGCTAACAATTTACCATTAGTGTACTTAAAAATGACTAATGGTCGGATTGCCGGCAATCCATCTAACCAGTACTTTGTTTCGCCGTACGTCGACTTGCTGTCTAACACACCGTTTGCACTGCCGGGCAAGGGTTTGTTTGTAACTTACTCAGACGGGAACTACACCACTCCTGTAACGCCTGATGCGGCGGCTGCGGTAGGTCCGTGCGCGATTGTGGTTGCGGGTCAGGGCGAGGATTTCGAGAAAGTACGGCAATGGACTATTCCAGGCAACTCTACGATGGTGCTGTTGTCACAAACAGTAGAACAAGGCTGGATCTTGTACTTTGCTGAAGAGATCCCGGTGATTCTGAATGGGCGGGAGTACGCCTTACCGATCACCAGTATCGACCTGCGTAATGTGAAAGCTAACCCGGCGAGCACCACCTTCTTTGTCTACATTGAAGCTGTGGATGCAACTACTGCGAAGTACACCATCTCAGCCACGGAGTTGGCGGCTGCGACCACACGGATGTTCATTGGCACGGTAGCAACCAATACGTCACAGATCAACACGATCAACGTGACCAAGCGATCGGGTCTGAATAAGTACCAGATCTCTGCGGTGAAAGCCGGATCGTCTATTCCGGTGTCAACCGGCTTGCCGTTCCAACGCGGTAACTGGAGTCAGGAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2ef36a890f3364308af5abb2229662812e71ce516fd20902c62e37a6bba55239
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3949
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50