Protein

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Genbank accession
AXQ66751.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MPSKITQALKDYLNNNDKVQLAHLVRIELPGELASFAYYTDYSREIQYDGQEFVPGKVKNISDVKQSNRLSAHNVTIKITGASSEEVDRAVRSQQYLNKKISIWRVVLDNTTGEVVPYYADGSTLLFFEGTITEVSIDENRSATSRGESTISWKCANEFYDLERVNGRLTDDESHRGLIVDQDGEEVPSNAAKRFEYQTDLGFFHANKSVNILAKYQGLEQAYKLKKKSSGLFGIKKSYDLVEYWETVEKEVDMRFNLAAKNIPTIYGVQKTQGIPVFADTLLDDPSTVYVVYAFCEGEIDGFLDIWMEDKPLVCNDTNDADERACFGVKRGNGDTISVATPTQDPTAPSVHGQEYIVQDGLGQVSFWTFHGKRDQTACSKLVDIAANGNFYLQNNGPTPMGPEYWDSRYKLLDTAYVVAEFKITDQRTEIPTIYAEIQGRKVAVYDENGLVRDDRTSTNPAWQMLDYLNSPIFGAAVGMDRIDLNTFVEVANLLGTVDNTYELSWVPFWRYIGWEDNTTEANKAILQTNPLLNGETSLFKNMKSMLEQAESSLNIIEGKYALTVESLKDPVADLTEADLVGGRLQVSDITSKEKYNTVQADIRDPGIGWESNDIIFFNADFKAEDSQLEKKANISFPHITNYYCARALAERVLKKSRYNREVSITVPYKYVDLPINSPITLTYERFGWDKKQFLIRETVWQSTGKVKLKLREYEDGVFINSPQADIGDSQIPEIGTKVLPPRDLNYRPSIPGDPEGVNGYLRWLPSFSPDVTYYAINYTGVASTITVNASSTDEPSTYIELPVDTITEDRIYTFEVRAVAGNKGLSSSPAILSLQLGPDGTKNLTMVTGFDLVNNITGDETIWKGAEVSLQWNPIFEEDFMDNIYYNLEFWDGDFDTGDLIRSLEIRNAYAYIYDLPANKSDYLAAKGTKGMFRQLGVRIRAESDDGAKSVGWTKI
Physico‐chemical
properties
protein length:957 AA
molecular weight: 107784,28660 Da
isoelectric point:4,73028
aromaticity:0,10867
hydropathy:-0,42424

Domains

Domains [InterPro]
PF09931
ATT
7–141
PF09931 DC_0187
IPR032876
ATT
569–674
IPR032876
AXQ66751.1
1 957
Architecture
ATT
STR
ATT
STR
ATT 7-141 | STR 232-568 | ATT 569-674 | STR 675-952 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXQ66751.1
1 957
Domain Start End Length (AA) Confidence
N-terminal 1 308 308 0,9437
Central domain 309 544 237 0,1994
C-terminal 545 957 412 0,0182
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-308
Central
309-544
C-terminal
545-957

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_VpS_PG07
[NCBI] 		2301664 Uroviricota > Caudoviricetes > Demerecviridae > Pogseptimavirus PG07 >
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXQ66751.1 [NCBI]
Genbank nucleotide accession
MH645904.1 [NCBI]
CDS location
range 84527 -> 87400
strand -
CDS
ATGCCGAGTAAGATTACTCAGGCACTAAAAGACTACTTAAACAATAATGATAAGGTACAGCTAGCGCACCTAGTTAGAATAGAACTACCGGGAGAACTAGCTAGCTTTGCCTACTACACAGATTATTCTAGAGAAATCCAGTACGACGGACAGGAGTTTGTCCCTGGTAAGGTCAAGAATATCAGTGACGTTAAGCAGTCTAATAGGCTTAGTGCCCATAACGTGACAATTAAGATAACTGGTGCATCCTCCGAGGAGGTAGACCGTGCAGTACGCTCACAGCAGTACCTGAACAAGAAGATTTCTATATGGAGAGTAGTACTAGATAACACAACTGGTGAGGTAGTTCCCTACTACGCAGATGGTAGTACACTACTATTCTTCGAGGGTACCATAACTGAGGTGTCTATCGACGAAAACCGCTCAGCTACTTCTAGGGGCGAATCCACCATCTCTTGGAAGTGTGCTAATGAGTTCTATGACTTAGAGCGAGTAAATGGTAGGTTAACGGACGATGAGTCTCACCGAGGTCTTATCGTAGACCAAGACGGAGAAGAGGTTCCCTCCAACGCGGCTAAGAGATTTGAGTATCAGACGGACCTAGGCTTCTTCCACGCCAACAAGTCCGTAAACATACTAGCCAAATACCAAGGTCTAGAGCAAGCTTACAAGCTGAAGAAAAAGTCTTCAGGCCTTTTTGGTATTAAGAAATCTTACGACCTTGTAGAGTACTGGGAAACTGTGGAAAAAGAGGTTGATATGCGGTTCAACCTTGCAGCAAAGAATATCCCTACTATTTATGGGGTTCAAAAGACCCAAGGTATCCCAGTATTCGCAGACACACTGCTAGACGACCCTTCAACTGTATACGTAGTATACGCTTTCTGTGAAGGAGAGATAGATGGATTCTTAGACATATGGATGGAAGATAAACCTTTAGTATGTAATGATACTAACGATGCTGATGAGCGAGCTTGTTTTGGTGTAAAAAGAGGTAACGGGGACACTATCTCTGTTGCTACACCTACTCAAGACCCTACAGCGCCTTCTGTACATGGGCAAGAATACATCGTTCAGGATGGTTTAGGGCAAGTAAGCTTCTGGACATTTCATGGTAAAAGAGACCAGACAGCATGCTCTAAGCTAGTAGACATAGCAGCTAACGGAAACTTCTATCTACAGAACAACGGGCCAACCCCTATGGGACCAGAGTACTGGGACTCTAGGTATAAGCTACTAGACACTGCGTATGTGGTAGCCGAGTTTAAAATAACCGACCAAAGAACAGAAATACCTACTATCTATGCAGAGATACAGGGAAGAAAAGTAGCTGTCTATGATGAGAATGGGCTAGTAAGGGATGATAGAACAAGCACCAACCCAGCATGGCAGATGCTAGACTACTTAAATAGCCCTATCTTCGGGGCCGCTGTAGGTATGGACCGAATAGACTTGAATACTTTTGTAGAGGTAGCAAACCTACTAGGTACAGTAGACAACACCTATGAGTTATCGTGGGTACCATTCTGGAGATACATCGGTTGGGAGGACAATACCACTGAGGCGAATAAGGCTATTTTGCAAACCAACCCACTGTTGAATGGAGAGACTTCTCTCTTTAAAAACATGAAGAGTATGTTAGAGCAAGCCGAGTCCTCTTTGAATATCATTGAAGGTAAGTACGCACTTACTGTAGAGTCCCTAAAAGACCCTGTGGCGGACCTAACCGAGGCAGATTTAGTTGGTGGACGACTTCAAGTCTCAGATATTACGTCCAAGGAAAAGTACAACACAGTGCAGGCAGATATTAGAGACCCTGGCATAGGGTGGGAATCCAACGACATTATTTTCTTTAATGCAGACTTCAAAGCGGAAGACAGTCAATTAGAGAAAAAAGCCAATATCTCCTTTCCACATATAACTAACTACTACTGTGCTAGGGCTTTAGCGGAACGAGTTCTCAAGAAGTCTAGATACAACCGAGAGGTTTCTATTACAGTGCCTTACAAGTATGTAGATTTACCTATTAACTCCCCAATAACTTTAACGTATGAGCGTTTTGGTTGGGACAAGAAGCAGTTCCTAATCAGGGAGACCGTATGGCAATCTACTGGTAAGGTTAAGCTGAAACTTCGAGAATACGAGGATGGGGTATTTATTAACTCCCCTCAGGCGGATATAGGAGACTCTCAAATTCCAGAGATAGGTACTAAGGTACTTCCTCCTAGGGATTTGAACTATAGGCCTTCTATACCTGGGGACCCTGAAGGAGTGAATGGATATTTAAGATGGCTTCCTAGTTTCTCTCCTGACGTAACGTACTACGCAATCAACTATACTGGAGTAGCTTCGACTATCACAGTCAACGCCTCCTCCACGGACGAGCCTAGTACGTACATAGAGCTTCCTGTAGACACTATTACTGAGGATAGGATTTATACTTTCGAAGTCCGAGCGGTAGCAGGCAATAAAGGATTATCTTCCTCTCCGGCTATACTCTCCTTGCAACTAGGGCCCGACGGTACAAAAAACCTTACTATGGTGACGGGATTTGACCTAGTGAACAATATTACAGGGGATGAGACAATATGGAAAGGTGCGGAGGTTAGCCTACAATGGAATCCTATATTCGAAGAAGACTTCATGGATAATATATATTATAATTTGGAATTTTGGGACGGCGATTTCGACACGGGTGACCTAATTCGTTCGCTAGAGATACGTAATGCTTATGCTTACATATACGACCTCCCTGCTAATAAGTCAGACTACTTAGCTGCTAAAGGCACTAAAGGTATGTTTAGGCAGTTAGGGGTTAGGATACGAGCAGAATCAGATGACGGAGCTAAATCCGTGGGATGGACAAAAATATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
3cbac5b31a282696ccbdfa13c057f27812bc3b79cb63811d967e1766856b86df
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7827
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequencing of PG07 Ding,T. — — GenBank