Protein

View in Explore
Genbank accession
XCO41203.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MALVKLVSAQSPTGGQYDCTDMSALRAFKCARLGQEVVLREHTAGSGAGGGVWYCHALTASSAVDDNGCQIINNHGQVMRRKAVKELTSSDFGLQAGDTIDGVLLNMYKASRTFNIYEAKIENPGFDKGYVLQGALRFYCGDKPFYIHSYSVSTLRGPNLWHTGNNVGITFSRFKEDGTSQQAWSGGGIKGFRIWGAASYLVQGNTGADATPVRLSDMWQGEACDLWVTGYTGNTNGASVSLYNEFAWTEGARVENIMVRQSLRGLTFLRKHGTTATGSFFRVVADVSFNAGVSGQSTQVMVVGDGTAAGECLVYGHDIKLTQWMRAGSWHDIVRLEDYSIIAETGVIKIVADGYGISKTTVPATEVVHSINVRGLNARFRSRVENWSNQAGGWGLDFLNIIFQSSMYTNAMTFYESDFDALPTINPVGMKIRFNGTFTVDERLSGKIYTLNGLIPGMTLKVKLTSRNGNDLNDAVVQEWKVFVRSTNLPCIVVPMSGSANIATTDGLAVTNISPVQTATFLKTVTPTQARNFIGQNYGLTVKNANDDNGLSYAVNSGRKIRFILPANPGATTTSPYSVEIEVL
Physico‐chemical
properties
protein length:584 AA
molecular weight: 63317,74910 Da
isoelectric point:8,28627
aromaticity:0,09760
hydropathy:-0,11610

Domains

Domains [InterPro]
DC_0717
ATT
3–110
DC_0717
IPR059934
RBD
19–81
IPR059934 DC_0250
XCO41203.1
1 584
Architecture
ATT
STR
ATT 3-110 | STR 111-584
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO41203.1
1 584
Domain Start End Length (AA) Confidence
N-terminal 1 100 100 0,9867
Central domain 101 408 309 0,9802
C-terminal 409 584 175 0,9803
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-100
Central
101-408
C-terminal
409-584

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146051
[NCBI] 		3232230 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO41203.1 [NCBI]
Genbank nucleotide accession
PP889500.1 [NCBI]
CDS location
range 3666 -> 5420
strand +
CDS
ATGGCTCTAGTTAAATTAGTGTCTGCACAATCCCCGACGGGGGGTCAGTATGACTGCACCGATATGTCCGCGTTGCGGGCTTTTAAGTGCGCGCGCTTGGGGCAGGAGGTTGTGCTGCGGGAGCATACTGCTGGTTCAGGGGCGGGTGGGGGTGTATGGTACTGTCACGCACTGACTGCGAGCTCTGCGGTAGATGATAATGGGTGTCAGATTATCAACAACCATGGGCAGGTTATGCGCCGCAAAGCCGTAAAGGAGTTAACCTCAAGCGATTTTGGATTGCAGGCAGGAGATACCATTGACGGCGTGCTTCTTAATATGTACAAGGCTTCGCGTACATTCAACATTTATGAAGCAAAAATTGAGAACCCCGGATTTGACAAAGGATATGTACTGCAAGGTGCACTGCGGTTCTATTGTGGGGATAAACCGTTTTATATCCACTCCTATTCCGTAAGTACGTTACGAGGACCAAACCTTTGGCATACTGGTAATAATGTTGGGATCACGTTCTCTCGTTTCAAAGAAGATGGTACGTCACAACAAGCTTGGTCCGGCGGCGGAATCAAAGGTTTCCGCATTTGGGGTGCCGCGTCTTATCTTGTACAAGGTAATACCGGTGCAGATGCCACGCCGGTTCGCTTGTCGGATATGTGGCAAGGGGAGGCCTGTGACTTGTGGGTCACTGGGTATACAGGTAACACCAACGGTGCATCCGTGTCCCTGTATAACGAATTCGCTTGGACAGAAGGCGCTCGTGTTGAAAACATAATGGTTCGTCAATCCTTGCGCGGACTCACGTTCCTGCGTAAGCACGGAACAACGGCAACTGGTTCATTTTTTAGAGTGGTAGCTGATGTCTCATTTAATGCCGGTGTATCAGGTCAATCGACGCAAGTAATGGTTGTTGGTGATGGGACTGCTGCTGGTGAATGTCTCGTGTACGGGCACGATATTAAGCTTACTCAGTGGATGCGCGCTGGGTCATGGCATGATATTGTTCGTCTTGAGGACTACAGCATTATCGCGGAGACTGGGGTTATTAAAATAGTCGCGGATGGATATGGTATATCCAAAACCACCGTGCCAGCGACCGAAGTTGTCCACTCCATTAACGTCCGCGGACTCAATGCCCGGTTCCGGAGTAGAGTGGAAAACTGGTCGAACCAGGCTGGTGGTTGGGGGCTGGACTTCCTGAACATCATCTTTCAGTCCAGTATGTATACTAACGCCATGACTTTTTATGAGTCTGATTTTGACGCACTACCAACCATTAACCCTGTAGGGATGAAGATACGATTTAACGGTACATTCACCGTTGATGAGCGACTGTCCGGTAAGATTTATACCCTTAATGGGCTAATTCCTGGGATGACATTGAAGGTCAAGCTAACATCTCGCAACGGTAACGACCTCAATGATGCTGTTGTTCAGGAGTGGAAGGTATTTGTTCGTAGCACTAACCTACCCTGTATAGTCGTCCCTATGTCTGGTAGTGCAAATATTGCTACCACTGATGGGTTGGCTGTCACTAATATCAGCCCAGTGCAGACTGCTACGTTCCTTAAGACGGTTACGCCTACGCAGGCTAGGAACTTCATCGGCCAGAACTACGGTCTCACTGTGAAGAACGCGAATGACGATAACGGTCTGTCCTATGCAGTTAACTCAGGTCGTAAGATTCGTTTTATTCTTCCGGCTAACCCAGGGGCAACTACGACATCCCCTTATTCAGTTGAGATAGAGGTACTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9d23b8e220432615edbf70b316fbbb88e13e8245eb812c64d0917b50d3274993
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6969
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank