Protein

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Genbank accession
AXF53484.1 [GenBank]
Protein name
putative minor structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAEFWSNNDRGYRIRLWVDQVGQDIQNNTSQVRLRLALLNTTTTFAQYQCNAFVDFNGQRLNWSGSPSMLGWNQTIQLIDQTITVRHADDGSGVFGVHAHFNGSGGWSPGNLDIGSQTITLTTIPRGSTVSVSDGVIGKQVDIAINRKIGGATHTLRYALGNKQGKIADNVGTSYKWTIPEDFANDIPNSTSGWGTIYVDTYINGNFIQTQSTVLTASIDTNLLKPSFTGFTLTDANPVSQRIIPEQKYFVSIMSLVKVTFNGAQAKNGATITGYYAEIVGANNSVSTNGGVFREVSVNQDTEMTLRGRVQDSRGIWSDWIETKITFLFYFSPALRFEVKRSDKKLDVLVIKRFAKIAPLTVNGVQRNTMKLTFTTRKVNSDNEVPDNGQAGGSWSQVSEFNASDAPLGNRYPADTSYIVTGKLEDEFTSAPFQDTVPTDEVIATYERKGVGIGKYREFGALDVAGDIYANNSQIQQYQLTSNNGAPKWVDGKPNVENANLLDEPGQYYLDASATGNPNSQWGYLFHYSNYGKNIDGFKEAIQTFWSNTGQLFFRHHRWSKIIDDWEPWVDYTPKKEPIVKKAIQIGYGLTANLVRKSNIVTLSIIRGTHSVDEGEYRSLDEKIPYGFRPCVQTHLVVHKNILTVYKSSAVWHLEPSGSMFFSNSDKDTAVYAGTVTYITEDEYPSN
Physico‐chemical
properties
protein length:687 AA
molecular weight: 76435,25040 Da
isoelectric point:6,16745
aromaticity:0,11208
hydropathy:-0,40757

Domains

Domains [InterPro]
IPR008577
STR
1–638
IPR008577
AXF53484.1
1 687
Architecture
STR
STR 1-638 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXF53484.1
1 687
Domain Start End Length (AA) Confidence
N-terminal 1 22 22 0,0017
Central domain 23 250 229 0,5104
C-terminal 251 687 436 0,6162
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-22
Central
23-250
C-terminal
251-687

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage 93
[NCBI] 		2268618 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus thermophilus
[NCBI] 		1308 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXF53484.1 [NCBI]
Genbank nucleotide accession
MH375593 [NCBI]
CDS location
range 19540 -> 21603
strand +
CDS
ATGGCTGAATTTTGGAGTAATAATGACCGTGGATATCGTATCCGTCTTTGGGTTGACCAGGTTGGTCAAGACATCCAAAACAATACAAGTCAAGTTAGATTGCGATTAGCGTTATTAAACACAACGACTACTTTCGCTCAATATCAATGTAACGCATTTGTTGATTTTAACGGTCAGCGATTGAACTGGTCGGGTTCTCCTAGTATGCTAGGCTGGAATCAAACAATCCAATTGATAGACCAAACAATAACTGTTAGACATGCTGATGATGGGTCTGGTGTCTTCGGTGTACACGCTCACTTTAATGGGTCGGGTGGTTGGAGTCCCGGAAACCTAGACATAGGAAGCCAAACCATAACACTGACGACAATTCCAAGAGGAAGCACGGTAAGTGTCTCAGATGGGGTTATCGGAAAACAAGTAGATATCGCTATCAACCGAAAAATAGGTGGCGCTACACATACACTACGCTACGCTTTGGGAAATAAACAAGGTAAAATTGCCGACAACGTTGGAACGTCGTATAAATGGACAATCCCAGAAGATTTCGCTAACGATATACCAAATTCAACAAGTGGATGGGGTACTATATATGTAGATACTTATATTAATGGAAATTTCATTCAAACGCAGTCAACCGTCCTAACGGCAAGTATTGACACGAACCTCCTAAAACCATCATTCACGGGATTCACGTTGACAGATGCTAATCCAGTATCTCAAAGAATAATCCCAGAGCAGAAGTATTTTGTATCCATCATGTCGCTTGTGAAAGTTACATTTAATGGAGCGCAAGCCAAGAACGGAGCTACCATAACTGGGTACTATGCTGAAATCGTTGGTGCTAACAACTCTGTTTCAACTAACGGCGGGGTGTTCCGTGAGGTTTCTGTTAACCAAGACACTGAAATGACCTTAAGAGGAAGGGTCCAAGACAGTCGTGGGATATGGTCTGATTGGATAGAGACGAAAATAACGTTTCTATTCTACTTTAGTCCAGCACTAAGATTCGAGGTTAAGAGAAGCGATAAGAAGTTAGATGTACTAGTTATTAAGAGATTCGCTAAAATCGCACCGCTGACTGTCAATGGCGTTCAGAGAAACACAATGAAGCTGACTTTCACCACACGAAAAGTCAATTCAGATAATGAAGTTCCAGATAATGGACAAGCTGGTGGAAGTTGGTCACAGGTTTCTGAATTTAACGCATCTGATGCTCCCCTTGGAAATCGCTATCCAGCTGATACATCTTATATCGTTACAGGTAAATTAGAAGATGAGTTTACAAGCGCTCCATTTCAAGACACTGTTCCAACGGATGAAGTTATTGCGACATATGAAAGGAAAGGGGTAGGGATTGGTAAGTACCGAGAGTTTGGCGCTCTTGATGTTGCTGGCGACATCTACGCTAACAACAGTCAGATTCAGCAATATCAGCTAACTAGTAATAACGGCGCTCCGAAATGGGTAGATGGAAAACCTAACGTTGAAAATGCTAATTTGCTAGACGAACCCGGGCAGTATTACCTTGATGCTTCTGCAACTGGTAACCCTAACAGTCAGTGGGGTTACCTATTCCATTACAGTAATTATGGGAAGAATATTGATGGTTTTAAAGAAGCTATTCAGACTTTTTGGAGTAATACTGGTCAGCTATTCTTCAGGCATCACAGATGGTCTAAGATAATCGACGACTGGGAGCCGTGGGTTGACTACACACCAAAAAAGGAACCCATTGTTAAGAAAGCAATTCAAATTGGATATGGTTTGACAGCAAACCTTGTGCGAAAGTCAAACATTGTAACCTTAAGCATAATCAGAGGTACCCATTCAGTTGATGAAGGTGAGTACAGGAGTTTAGATGAAAAAATACCATACGGATTCAGACCCTGTGTACAGACACACTTAGTTGTCCATAAAAATATACTAACTGTTTATAAATCAAGTGCAGTATGGCATCTTGAACCTAGCGGTAGCATGTTTTTTTCAAACTCTGATAAAGATACCGCTGTGTACGCTGGGACAGTAACTTATATCACTGAAGATGAATACCCAAGCAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
204c2ea2a62c1cd2d54e3dd80fbb9120928a1fed4e7b9f3b2dab44d6a0506a19
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8771
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of virulent Streptococcus thermophilus bacteriophages isolated in Uruguay Achigar,R., Campot,M.P., Tremblay,D., Labrie,S., Pianzzola,M.J. and Moineau,S. 2017-03-06 — GenBank