Protein

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Genbank accession
WIT94436.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,69
TF
Evidence RBPdetect2
Probability 0,92
Protein sequence
MEFIVVQGSKTLNLNNRKPLCSVTKAEHRQSLLSEDVINITVESKTPLALQVGNYIEYENRRYTLNSAPKVKKEQGYYAYDLVFEGVQYLLRDKVYFNLDAQGFQNTADFPLTGEINIFLTTLITNINSISDFTWVLGEYPQNTETKTLTFNNENCLAVLQKICQEYDTEFEIKQDLERKSYTLNIKKIGETLNQTFEYGKGNGLYSLSRVNVNDNVITRLYVFGSTDNIKSGYRDYSQRLRLPISHGKDYIQDDNKVSLFGLKEGVKNFDDIKPTFKGIVSGVTNLENGSQEIEVSNMDFDLNETDSNGTKYLLNDTPAKLHINKGNLAGYEFELLKNGGYNHATKTFRVKQFTDERGQKFPEAGSVFSFAVGDEFTLLDIAMPEQYITNAENKLFEEGQKEYEKQSVNNLKYNLELDPLYLQQIGASTSIFFKIGDYIRVIDEPLKIDKTTRIVDITRDLLDEYNYKIGIADTYEISFVASLLTDIKDTKTVIKTQEQINRRNYLNGYRNLQELRESVFDVEGYFDPTHIKPESIEANMLSVGAKSQQFALENISLNPNIEGNPARTFISGGKLIHFSLEDDIREWNILPYSRNDLLNQVYYVYAKCSRGNSMGVWHITTEQIKFDSRSDYYYFLCYLLYTPKDGKREAESMYGNVFMHGGQITAGRIKSLNGQTYFDLDNGEIAGTIKFKSGNGYAEVGSAIQQAVDAVSVGGRNLVRESNVFRNGISADGISSNITSEGYLRVISSISNNNWHTRWYSRTDEIEEQMTEGEAFTITFWVKRLSGYGKPTIYLKDGMGYFYLKGELNNSEFKPLSYTGTWKKAKSLHPHLGWAPANGEFIIKCWKIEKGNKATDWTPAPEDVQAEINAVKAKADQLDNLGTMAWQNSVEKAMLGSTVVQGGYIKTELLNASAIVSNGGGATTSQLNSAISSIVVGGRNYLIGSQKGYGMFNNNGRTLDLTQGEENGVRWISGVNVNNGNFSISTFFHLLNNLSVFTEDLTGQETIQSMEVKPTHDMYIGLWENNRKFCPANVWTKIENSPYNNTRFIGIYAIWNNDGSVPATAKIYHRNWKLEKGNIATDWTPAPEDLDALFANLQQGISSMQTSLSDVKTKTDNFASIQGGLMMANLMSVGSNQANQNAFISGITDEGAMSVRFGAGSNYANKHNAPFRVLDNGKVYGSDMEITGGKIARFNISGNTLSGQGIADPNDYLEIKSSGSILSYKKSLSSGRESYALINNDDSILNGNKNNILRLWGRDVNNYTPYNALSIRADGQYATALNIESGDIRVGGEVGYTGELFLGGVWLTIRKGIITNYS
Physico‐chemical
properties
protein length:1319 AA
molecular weight: 147830,72550 Da
isoelectric point:5,44565
aromaticity:0,10766
hydropathy:-0,44799

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WIT94436.1
1 1319
Domain Start End Length (AA) Confidence
N-terminal 1 730 730 0,9407
Central domain 731 939 210 0,4432
C-terminal 940 1319 379 0,2951
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-730
Central
731-939
C-terminal
940-1319

Taxonomy

  Name Taxonomy ID Lineage
Phage Riemerella phage vB_RanS_CRP19
[NCBI] 		3053250 No lineage information
Host Riemerella anatipestifer
[NCBI] 		34085 cellular organisms > Bacteria > Pseudomonadati > FCB group > Bacteroidota/Chlorobiota group > Bacteroidota

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WIT94436.1 [NCBI]
Genbank nucleotide accession
OR089151 [NCBI]
CDS location
range 1757 -> 5716
strand -
CDS
ATGGAGTTTATAGTAGTACAAGGAAGCAAGACCCTTAACCTCAATAATAGAAAGCCTTTATGTTCAGTTACCAAAGCCGAACACAGACAGTCTTTGCTATCAGAAGATGTAATAAACATCACCGTAGAAAGTAAAACTCCTCTTGCTTTGCAAGTGGGCAACTATATAGAATATGAGAACCGAAGATATACACTCAACTCTGCACCAAAGGTAAAAAAGGAGCAAGGGTATTATGCCTATGATTTAGTTTTTGAGGGAGTACAGTATTTATTGAGAGATAAGGTGTATTTCAACTTGGACGCTCAAGGTTTCCAAAATACGGCGGATTTTCCTTTAACGGGAGAAATAAACATTTTCCTTACGACGCTAATCACAAATATCAATTCCATTTCAGATTTTACTTGGGTTTTGGGTGAATATCCACAAAACACGGAAACTAAAACGCTGACTTTTAATAATGAAAACTGTTTAGCGGTTTTACAAAAAATATGTCAGGAATACGATACCGAGTTTGAAATCAAGCAAGATTTAGAGAGAAAATCTTACACGCTCAACATTAAGAAAATAGGCGAAACTTTAAACCAAACCTTTGAATATGGAAAAGGAAATGGGCTTTATTCTTTAAGTAGAGTAAATGTGAATGATAATGTGATTACCCGTCTTTATGTTTTCGGCTCAACGGACAATATTAAAAGCGGATACAGGGATTATTCACAGCGTCTGCGACTGCCTATTTCTCACGGAAAGGATTATATTCAGGACGATAACAAAGTCTCTTTATTTGGCTTAAAAGAGGGTGTTAAAAATTTTGACGACATCAAACCTACTTTTAAGGGGATAGTATCAGGCGTTACCAATTTGGAAAACGGCTCGCAAGAGATAGAGGTTTCTAATATGGACTTTGACCTGAACGAAACTGACAGCAACGGTACAAAGTATTTATTAAACGATACTCCCGCGAAGCTCCATATAAACAAAGGAAATTTGGCAGGATATGAATTTGAGTTGCTTAAAAACGGAGGTTACAACCACGCTACTAAGACTTTTAGAGTAAAGCAATTTACAGACGAAAGAGGACAAAAGTTTCCAGAAGCAGGTTCTGTGTTTTCATTTGCTGTCGGCGATGAGTTCACATTGTTAGATATTGCAATGCCCGAACAGTACATTACTAATGCCGAAAACAAGCTCTTCGAAGAGGGACAAAAGGAATACGAAAAACAGTCGGTAAACAATCTTAAATATAATTTAGAGTTAGACCCTCTGTATCTTCAACAGATAGGGGCTAGTACATCTATTTTCTTTAAAATAGGGGATTATATCCGTGTGATAGATGAGCCTCTTAAAATAGACAAAACGACACGCATAGTAGATATTACGAGGGACTTATTAGATGAATATAATTACAAAATAGGCATTGCGGATACTTACGAAATCAGTTTTGTAGCAAGTCTGCTTACCGATATTAAAGATACCAAAACGGTTATAAAAACGCAGGAGCAAATTAATAGACGAAACTATTTAAACGGTTATCGTAACCTGCAAGAGCTTCGAGAAAGTGTCTTTGATGTAGAAGGATACTTTGACCCTACACATATCAAGCCAGAGAGTATAGAAGCCAATATGCTTTCGGTTGGAGCAAAGAGTCAACAATTTGCATTAGAAAATATAAGTCTGAATCCTAATATAGAGGGTAATCCTGCAAGAACATTTATTAGCGGTGGGAAATTGATTCATTTTTCCTTAGAAGACGATATTAGAGAATGGAACATATTGCCATACAGCCGTAATGACCTGTTAAATCAAGTTTACTATGTCTATGCAAAATGCTCAAGAGGGAATAGTATGGGGGTGTGGCATATTACCACCGAGCAAATAAAATTTGATAGTCGGTCAGATTATTATTACTTCTTGTGTTACTTACTCTACACACCAAAAGACGGTAAACGAGAAGCAGAATCAATGTACGGTAATGTGTTTATGCACGGAGGGCAAATAACGGCAGGAAGAATTAAATCTCTCAATGGTCAAACCTATTTTGATTTAGACAATGGGGAAATAGCAGGAACGATTAAGTTTAAAAGCGGTAATGGTTATGCGGAAGTTGGGAGTGCTATACAACAAGCGGTGGATGCGGTAAGTGTAGGAGGTAGAAATTTAGTGAGAGAATCCAATGTTTTTAGAAATGGTATATCGGCGGACGGAATAAGCAGTAATATAACTTCAGAAGGATACTTGAGGGTTATTAGCTCAATTTCAAATAACAATTGGCATACAAGATGGTATTCAAGAACAGATGAAATAGAGGAGCAAATGACAGAAGGCGAAGCCTTCACTATTACCTTTTGGGTGAAAAGGTTGAGTGGCTATGGCAAGCCTACTATTTATCTAAAAGATGGAATGGGCTACTTTTATCTGAAAGGCGAATTAAACAACTCCGAATTCAAGCCTCTAAGCTATACAGGAACTTGGAAAAAAGCCAAATCATTACACCCTCATTTAGGTTGGGCACCTGCAAATGGAGAATTTATCATTAAATGTTGGAAAATTGAAAAAGGTAACAAAGCAACAGATTGGACACCCGCTCCCGAAGATGTACAGGCAGAAATTAACGCTGTAAAAGCGAAAGCCGACCAATTGGATAACCTTGGTACAATGGCGTGGCAGAACTCGGTAGAAAAAGCGATGTTGGGTAGTACGGTAGTACAAGGGGGGTATATCAAAACAGAACTCTTAAACGCTTCGGCAATAGTGAGTAACGGCGGAGGGGCAACAACCTCACAATTGAATAGTGCCATCAGTTCAATAGTAGTTGGAGGTAGAAACTATCTCATAGGTTCTCAAAAAGGATACGGAATGTTTAACAACAACGGAAGAACATTGGACTTAACACAGGGAGAGGAAAATGGAGTAAGGTGGATTTCTGGAGTAAATGTAAATAATGGTAATTTTTCAATTTCTACATTTTTCCATTTACTTAATAATCTAAGTGTTTTCACGGAAGACCTCACAGGGCAGGAAACTATCCAATCAATGGAAGTAAAGCCCACTCACGATATGTATATAGGTCTTTGGGAGAATAATAGAAAATTTTGTCCTGCGAATGTTTGGACGAAGATAGAAAATTCTCCATATAACAACACTCGTTTTATAGGCATATATGCGATATGGAATAATGACGGAAGTGTTCCTGCAACTGCAAAAATTTACCACAGAAATTGGAAGTTAGAGAAAGGTAACATAGCTACCGATTGGACGCCCGCCCCCGAAGACTTGGACGCACTATTTGCTAACCTTCAACAGGGGATAAGCAGTATGCAAACTTCGTTATCTGATGTAAAGACCAAGACCGATAATTTCGCCTCTATCCAAGGTGGTTTGATGATGGCTAACTTAATGTCAGTCGGAAGTAACCAAGCCAATCAAAATGCTTTTATTAGTGGTATTACCGACGAAGGGGCAATGAGCGTGAGGTTTGGAGCAGGTAGCAATTATGCCAATAAACATAATGCTCCGTTTAGGGTGCTGGATAATGGGAAAGTTTATGGCTCTGATATGGAAATTACGGGTGGTAAAATAGCAAGGTTCAATATTAGCGGAAATACACTTTCGGGGCAAGGAATAGCAGACCCAAACGACTATTTAGAAATAAAGTCATCTGGAAGCATACTTTCATATAAAAAAAGTCTTTCATCTGGGAGAGAAAGCTATGCTCTCATCAATAATGATGATAGTATTTTAAACGGAAATAAAAACAATATACTTCGGCTCTGGGGGCGTGATGTGAACAATTATACGCCCTACAACGCCCTATCTATAAGGGCTGACGGACAGTATGCTACTGCCTTAAATATAGAATCGGGAGATATTCGTGTGGGTGGAGAGGTAGGATATACAGGAGAATTATTTTTGGGGGGAGTATGGCTTACCATTAGAAAAGGTATAATAACAAATTATTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9388ec171b25bb4fdeb71cbbbbb0eb89ab65d89f5671e393f3e749f17990846c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6792
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50