Protein

View in Explore
Genbank accession
QVW55036.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MENWLVAHAVRNAWQRPSNDGVLNIAPNRITPNSGAIGFIRDGRASMPLPGEGWWHVYTVDKLHLNFGNIKLPPDRWKKLSTCVNAMSAFMLLYNDRGTTFPLSKARVIKRASGQILLALPQSERYSWLDTETLYWRIYAGYDGGDYAGLPLPTFVEPWDTPNGTQIQRACDRYRALQAAKQGHVTFWLNGVLTESPVPGDIATWDDVEIHVDGRVKRVVDFRCGDLPTFQSTLDSKRKYLLHLPKGSENWTFNNDVEIHVLRQRDGRYYWKHRHLSVRQVTFNDLSIPTERISQLRNSFKNLNDIDDLVIRVVIRDDYLRTPVLFNSQHVHDLYRLEDPLIISAMTGVNSTMPEWLAKNLEQAAYNKVAAAQFQNITRDLCTEAYGYNATSRYTADTPQHLILDNGVWRCTLPDLLAVRSVVYEYDGNGMLLGWSRHSGTTDYRAKNPAARIAEAIAGDVDDAVHIVDNAPDFDIPEGINVTLWLRKLVSGVGTNEYTLAVEGTDYTRIGAAITWTVDRTRRWPTVIYDDVHLLFEQTINVNQGQIRVPILGRSASEPIRTLWTPMETVEVWLNDHPLVFGIDYVVVWPEIVVVSKAWMSDGQTNKVTVRARGVTGVTRAPKTGFVSSGLFSNNSHFDVRDDKVIRVVAGGGILTRNDVVFREDNSVGTDVVPDGFPFSVDDPTIPLRTLVSQDTYAMRDTSRDLDARTEEYLTTFFPTPPPVNPVPLQGWYHLFSPLLNKLLWDYKNKNLILVEDDPNYRISTAQLDRVMEGYISLLQFDPAYIGYDKAFVRMHPHSLYQVVEVDELGFAFLDRVNARYLNSEIQLNQYLKIKG
Physico‐chemical
properties
protein length:836 AA
molecular weight: 95095,49350 Da
isoelectric point:5,95453
aromaticity:0,10526
hydropathy:-0,29952

Domains

Domains [InterPro]
IPR055617
STR
2–835
IPR055617
QVW55036.1
1 836
Architecture
STR
STR 2-835 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QVW55036.1
1 836
Domain Start End Length (AA) Confidence
N-terminal 1 209 209 0,9589
Central domain 210 495 287 0,1533
C-terminal 496 836 340 0,0191
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-209
Central
210-495
C-terminal
496-836

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_4
[NCBI] 		2835894 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVW55036.1 [NCBI]
Genbank nucleotide accession
MW812338 [NCBI]
CDS location
range 236815 -> 239325
strand +
CDS
ATGGAGAACTGGCTGGTCGCTCATGCGGTGCGAAACGCATGGCAGCGTCCAAGTAACGATGGGGTGCTTAACATCGCCCCTAATCGCATCACTCCGAATTCAGGGGCTATCGGTTTTATCCGTGATGGACGAGCGTCCATGCCACTCCCAGGTGAAGGTTGGTGGCACGTCTACACGGTAGACAAACTGCACCTTAATTTCGGTAACATCAAACTCCCACCCGACCGCTGGAAGAAACTCAGCACTTGCGTGAACGCGATGAGCGCTTTCATGCTGCTGTACAATGACCGGGGCACTACTTTCCCGCTGAGTAAAGCACGGGTCATCAAACGGGCTTCGGGTCAGATTCTGTTGGCCTTGCCGCAAAGCGAACGCTACAGCTGGCTGGATACCGAAACCTTGTACTGGCGTATCTACGCCGGGTATGACGGTGGGGACTATGCGGGCTTGCCGTTGCCGACGTTCGTGGAACCTTGGGATACGCCGAATGGCACCCAGATTCAACGAGCCTGTGATCGTTACCGTGCACTGCAAGCGGCGAAACAAGGTCATGTGACGTTCTGGCTGAACGGGGTGCTGACCGAGTCTCCGGTACCGGGTGACATTGCGACCTGGGACGATGTGGAGATTCACGTCGATGGTCGTGTGAAGCGTGTGGTCGATTTCCGTTGTGGGGATTTACCGACCTTCCAGTCTACCCTGGACAGTAAACGTAAGTATCTGCTGCACCTGCCGAAAGGGTCAGAGAACTGGACGTTCAACAACGACGTCGAGATTCATGTCCTGCGTCAACGTGACGGCCGCTACTACTGGAAGCATCGACATCTGTCGGTACGTCAGGTCACGTTCAATGACTTGAGCATTCCGACCGAACGTATCAGTCAGCTGCGCAACAGCTTTAAGAATCTGAACGACATCGATGACCTGGTGATTCGTGTGGTGATTCGCGATGACTATCTGCGTACGCCGGTGCTGTTCAACTCGCAGCATGTGCACGACTTGTATCGTCTGGAAGACCCGTTGATTATCTCGGCCATGACGGGGGTGAACTCCACCATGCCGGAATGGCTGGCGAAGAACCTCGAGCAAGCGGCGTACAACAAAGTTGCAGCAGCCCAGTTCCAGAACATCACCCGTGACCTCTGCACGGAGGCGTACGGCTATAACGCGACGTCTCGCTACACGGCAGATACTCCACAGCACCTGATTCTGGATAACGGCGTTTGGCGTTGTACGTTGCCTGACCTGTTAGCCGTCCGTTCCGTTGTCTATGAGTACGACGGAAACGGTATGCTGTTAGGCTGGAGCCGTCACAGCGGTACCACCGATTACCGTGCGAAGAATCCTGCTGCTCGTATTGCGGAAGCCATCGCGGGGGATGTGGATGATGCGGTTCACATCGTGGACAATGCTCCGGACTTTGATATTCCGGAAGGCATTAACGTCACGCTGTGGCTACGTAAGCTGGTCAGTGGGGTCGGCACCAACGAGTACACGCTGGCAGTCGAAGGCACGGATTACACCCGCATTGGGGCAGCCATTACCTGGACGGTTGACCGAACTCGTCGTTGGCCAACGGTGATTTACGATGATGTGCACCTGCTGTTTGAGCAGACCATCAATGTGAACCAGGGACAGATTCGTGTTCCGATTCTGGGACGCAGTGCCTCCGAGCCGATTCGTACGCTGTGGACGCCGATGGAAACCGTCGAGGTCTGGCTGAACGATCATCCGCTGGTCTTCGGGATTGACTACGTCGTGGTCTGGCCGGAAATCGTGGTGGTGTCGAAAGCGTGGATGTCCGATGGGCAAACCAACAAGGTGACGGTGCGTGCGCGTGGTGTCACTGGGGTCACGCGAGCACCGAAGACGGGCTTTGTGTCCAGTGGGTTGTTCTCGAACAACAGTCACTTCGACGTGCGGGATGACAAAGTGATTCGTGTGGTCGCTGGGGGTGGGATTCTGACGCGGAACGATGTGGTGTTCCGTGAAGACAACAGTGTGGGGACGGACGTTGTTCCCGACGGGTTCCCATTCTCGGTTGACGACCCAACGATTCCGTTGCGTACCTTGGTCAGTCAGGACACCTATGCCATGCGAGACACTTCGCGTGACCTGGATGCCCGTACGGAAGAATACCTGACGACCTTCTTCCCAACGCCACCGCCGGTTAACCCGGTACCGCTGCAAGGCTGGTACCACTTGTTCAGTCCGCTGCTGAATAAACTGCTGTGGGACTACAAGAATAAAAATCTGATACTGGTGGAAGACGATCCGAATTATCGTATCTCAACTGCCCAGCTGGATAGAGTCATGGAAGGTTACATTAGCCTCCTGCAATTTGACCCGGCTTACATCGGCTATGATAAAGCCTTTGTGCGTATGCACCCGCATTCGCTGTACCAGGTTGTAGAAGTTGATGAGTTGGGCTTTGCTTTCTTAGACCGTGTGAATGCCCGGTATCTGAACAGTGAGATTCAGCTGAACCAGTATCTGAAAATCAAAGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
20105a3fdefdedf07b00c49b1efec5fc18aef9f9a300b3b3a19ab56cf6e2ea64
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3086
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_4 Kim,S.G., Lee,S.B. and Park,S.C. 2021-01-07 — GenBank