Protein

View in Explore
Genbank accession
XFA12284.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSTITQFPSGSTQYRIEFDYLARTFVVVTLVNSYNPTLNRVLEVGRDYRFLNPTMIDMLVDQSGFDIVRIHRQTGTDLVVDFRNGSVLTASDLTNSELQAIHIAEEGRDQTVDLAKEYADAAGSSAGNAKDSEDEARRIAESLKASGQISYITRRSFEKGFNVITWNEVLLWEEDGEYYRWDGTLPKNVPAGSTPETSGGIGLGAWVSVGDATLRSDLSSVDGISVVGAANYANIRAYTGPANHINCYGRSSIFDNASGYFFADSSDTTTQDNDGTVLVDASGRRWKRSYTGPVDARWFGVTANGSTDDTVAANKALATLQHVVFPVGIIIISAPLIFGTQTIEGAGTYPNGSYGTIIQCTGDHAAFEHAPTRYQPGGIIRNFWINYQAGKPTITTGNAKGVNFGTSNTSIDPLVNGATKFIVENVIVRGAYWGFYDVTSTYLMEYRNCWAWDCYVGFKKHYGTTIKYSSCYALDCYGSWDMQDSHCATFENCAYDGTSIIGNIKPIYFKGCPGVTINGMQHESSKIDVSGRGDFVIENCVGFVLNGMSIPSWLNTLTTGEAYLFEIINSTADIKGVALSADAANVKSSGANTYLFNAKSGSIVNVSASGLPAVAGSSFNYSMSADSTSRIDRTPSAVIGGLTAGAVFRNGVSAPVYVDYNSVTIAVGAVALIGTVTLPGVKYQDFLMADSSTGVNGCTIDVVRPAGAVGSVNVYIRNNNASPVTLTGQIAIRYLRP
Physico‐chemical
properties
protein length:737 AA
molecular weight: 79124,30330 Da
isoelectric point:5,10206
aromaticity:0,10448
hydropathy:-0,07531

Domains

Domains [InterPro]
DC_0369
STR
1–735
DC_0369
IPR005604
ATT
11–113
IPR005604 G3DSA:2.10.10.80 IPR012334
IPR040775
RBD
151–211
IPR040775 IPR011050
XFA12284.1
1 737
Architecture
STR
ATT
STR
ATT
STR
STR 1-10 | ATT 11-113 | STR 114-149 | ATT 150-221 | STR 222-735 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XFA12284.1
1 737
Domain Start End Length (AA) Confidence
N-terminal 1 308 308 0,9926
Central domain 309 641 334 0,9899
C-terminal 642 737 95 0,9744
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-308
Central
309-641
C-terminal
642-737

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage KM02
[NCBI] 		3248862 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli K-12
[NCBI] 		83333 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFA12284.1 [NCBI]
Genbank nucleotide accession
PQ179042 [NCBI]
CDS location
range 34690 -> 36903
strand +
CDS
ATGTCCACGATTACACAATTCCCTTCAGGAAGCACTCAGTACAGGATTGAGTTCGACTACCTAGCCAGAACGTTTGTTGTTGTTACGCTGGTGAATAGCTATAACCCTACCCTGAACCGTGTACTGGAAGTTGGTCGAGATTACCGATTCCTTAACCCAACGATGATTGATATGTTGGTTGACCAATCAGGTTTCGACATCGTTCGTATTCACCGTCAGACTGGAACTGACTTAGTGGTAGACTTCAGGAACGGCTCAGTGTTGACAGCTAGTGACCTGACCAATTCAGAGCTTCAGGCTATCCATATTGCAGAAGAAGGTCGAGACCAAACGGTTGACTTAGCGAAGGAATATGCCGATGCTGCTGGTAGCTCTGCTGGCAACGCTAAGGATAGCGAGGATGAAGCACGCAGAATCGCTGAGAGTCTCAAGGCATCTGGTCAAATTAGCTATATTACCCGTCGCTCCTTCGAGAAAGGCTTCAACGTTATAACATGGAACGAGGTACTGCTATGGGAAGAGGATGGTGAGTATTACCGCTGGGATGGTACGCTTCCAAAGAACGTTCCTGCTGGTTCAACTCCTGAAACTTCCGGTGGGATTGGATTAGGTGCGTGGGTTAGTGTAGGTGATGCTACATTAAGATCTGACTTATCATCTGTGGATGGAATCAGTGTTGTTGGAGCAGCAAACTACGCAAATATCCGCGCATATACAGGCCCAGCTAACCACATTAACTGTTATGGTAGAAGCTCTATTTTTGACAATGCTTCTGGGTATTTCTTCGCGGATTCATCCGATACGACAACCCAAGACAATGACGGAACTGTGCTTGTCGATGCGTCCGGTCGTCGCTGGAAGCGCAGCTATACAGGGCCTGTCGACGCCCGCTGGTTCGGAGTTACGGCAAACGGGAGCACGGATGACACCGTTGCAGCTAACAAAGCGCTGGCAACACTTCAACATGTGGTCTTCCCGGTAGGCATAATAATAATCAGTGCACCTCTTATCTTTGGTACTCAGACCATCGAAGGCGCTGGAACTTATCCAAATGGCTCCTACGGTACTATCATCCAGTGTACAGGCGACCATGCCGCGTTTGAGCATGCTCCTACTAGGTATCAGCCGGGAGGTATTATTCGTAACTTTTGGATTAATTATCAAGCAGGGAAACCAACTATAACCACTGGAAATGCCAAAGGTGTTAACTTCGGTACGTCCAACACGTCTATTGATCCGCTGGTTAATGGCGCGACCAAATTTATAGTAGAAAACGTCATTGTCCGTGGTGCTTATTGGGGCTTCTATGATGTAACGTCTACATATTTAATGGAGTACAGGAACTGCTGGGCATGGGACTGCTATGTTGGGTTTAAAAAGCATTACGGAACTACCATAAAATATAGCTCTTGTTACGCACTGGACTGCTACGGCTCGTGGGATATGCAAGATAGTCACTGCGCCACCTTTGAGAACTGCGCCTACGACGGCACAAGCATCATCGGTAACATTAAGCCTATTTACTTCAAAGGATGCCCAGGCGTCACAATTAACGGGATGCAGCATGAATCAAGTAAAATTGACGTTTCAGGACGTGGTGACTTTGTTATCGAAAACTGCGTTGGGTTTGTGCTTAATGGCATGTCAATTCCTTCCTGGCTTAATACGTTAACTACCGGAGAAGCATATCTATTTGAGATTATAAACTCCACGGCAGACATAAAGGGAGTAGCCCTCTCTGCGGATGCCGCCAATGTGAAAAGCTCGGGTGCGAATACGTATTTATTTAACGCCAAGAGCGGAAGTATCGTCAATGTTTCGGCGAGCGGGCTACCGGCTGTGGCTGGGTCATCTTTCAATTACAGCATGTCGGCAGACAGTACCAGCAGAATCGACAGAACTCCAAGTGCGGTAATTGGTGGATTGACCGCTGGTGCGGTGTTTCGTAACGGCGTGTCCGCGCCTGTGTATGTGGATTACAATTCTGTTACGATTGCCGTTGGTGCTGTTGCATTGATTGGTACCGTAACCCTGCCCGGAGTTAAATATCAGGACTTCCTGATGGCTGACTCGTCAACAGGGGTGAATGGTTGCACTATAGATGTTGTTAGGCCAGCGGGAGCAGTTGGGAGTGTTAACGTTTATATCCGTAACAACAACGCATCCCCTGTCACCCTTACAGGCCAAATCGCAATAAGATATCTTAGACCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
2cd9e8fcbe482f62721d393f6a1b8d87ed00ecc4f1b311f635a53222fd57c19e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8279
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of three Escherichia coli Bacteriophages Isolated from Activated Sludge in Domestic Wastewater Treatment Plants Nittami,T., Fujii,Y., Wein,Y., Motoyama,K., Sasaki,M. and Batinovic,S. 2025-09-11 — GenBank