Protein

View in Explore
Genbank accession
YP_009849291.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MSDYSAKITELPGGSKVRESSLLPLATAKTAGGITEKFTVAQLRKGLNYENAYNTLAEAIPDTVQGEVFFVFTGPDKTAVAEYLRGASGAGQVLDEAGTPVVHLTPKGLASYRVIPNMATLRTTKPKNPNEIVEVTEYYTGKMNGGGRFVSAVNTTVPDDGGYTTIRVDENTVWYRQDLRALTLWDGGCDNSVADNGPFIQNIQYSRSLQPIKVPSQYFGIRTPIVIKANKGFALYADGAHTGRAVLQWMGGDFNDDTTAVLSITVDNPTDFTYSGVVLKGFSILGGGKVLHGLYMRNVGYPEIDSLKIENFKGAGLLLDQVQDGYFNFLEVQVCGRTSGDYGVYADLVNLSKTQFAPIHIISSKSGDASNMLRFQGGQWEANNCSPTVYYRGGIGLWISKIHCEQRNGPMSKFKLYDPNFVMDTSPEKAGRVFIQVDGSSSSEVMLDQMQSSETERFVYAGGYGVVMITNTTRGGGICLASANREFAMTITNSWLTDCYFGPSSRVWIDNCRLGNLTWSYPSYTGLISNTMMKDVVMNNDGSFPDINFNNCIFDNFTNYVKNVRVTGGHCKGNFSFNASGGGGAVIGTVIDGTLSVDTKWGIDFRPSGAVMNQVYSNNAPTEQAPNGTRPNGSIWINKNVVANAPDGTPFSWVKDAAGKWVPYAFTGAFANGVVAKEYTFANLPAPSSCKRAIVTCTDSAKTPKDQLVYSDGANWRYVADPATVVTKG
Physico‐chemical
properties
protein length:729 AA
molecular weight: 78967,90070 Da
isoelectric point:6,16376
aromaticity:0,10700
hydropathy:-0,22030

Domains

Domains [InterPro]
DC_1164
ATT
2–119
DC_1164
DC_1709
STR
99–694
DC_1709
IPR059934
RBD
115–176
IPR059934
YP_009849291.1
1 729
Architecture
ATT
STR
ATT 2-119 | STR 120-694 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009849291.1
1 729
Domain Start End Length (AA) Confidence
N-terminal 1 196 196 0,9929
Central domain 197 613 418 0,9959
C-terminal 614 729 115 0,9862
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-196
Central
197-613
C-terminal
614-729

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage Moabite
[NCBI] 		2587814 Uroviricota > Caudoviricetes > Chimalliviridae > Moabitevirus moabite >
Host Serratia marcescens
[NCBI] 		615 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009849291.1 [NCBI]
Genbank nucleotide accession
NC_048792.1 [NCBI]
CDS location
range 188654 -> 190843
strand +
CDS
ATGAGCGATTACAGCGCTAAGATTACGGAACTACCTGGTGGTTCTAAAGTAAGGGAAAGCAGCCTACTGCCATTGGCAACGGCTAAGACAGCAGGTGGAATAACTGAGAAGTTTACCGTAGCGCAGCTTCGTAAGGGACTGAACTACGAGAACGCGTACAATACCTTAGCCGAAGCCATTCCTGATACGGTACAAGGCGAGGTGTTCTTCGTATTCACTGGGCCAGACAAAACTGCGGTAGCTGAGTACCTTCGTGGCGCCAGCGGTGCAGGGCAGGTGTTGGATGAGGCAGGGACTCCTGTAGTCCACTTGACTCCAAAAGGGCTGGCGTCTTATCGCGTCATCCCTAACATGGCTACCCTGCGTACCACTAAGCCAAAGAACCCTAACGAAATTGTTGAGGTCACCGAGTATTACACCGGTAAAATGAATGGCGGCGGCCGCTTTGTATCTGCGGTTAATACGACCGTACCCGACGACGGTGGTTACACCACGATTCGTGTTGATGAGAATACCGTATGGTATCGTCAGGATCTGCGTGCGTTGACTCTGTGGGATGGTGGTTGTGATAACTCGGTAGCGGATAACGGTCCGTTCATCCAGAACATCCAATACTCCCGTTCTTTGCAACCGATCAAGGTGCCGAGTCAGTACTTCGGTATCCGTACGCCAATCGTAATCAAAGCTAACAAAGGGTTTGCTTTGTACGCAGATGGTGCCCATACTGGTCGTGCTGTACTGCAATGGATGGGTGGTGACTTTAATGACGATACCACTGCAGTTCTGAGCATTACTGTAGACAATCCTACTGACTTCACTTACTCAGGTGTAGTTCTGAAGGGATTCTCTATCTTGGGTGGCGGTAAAGTCCTACACGGCCTCTACATGCGTAACGTAGGTTACCCTGAGATTGATAGCCTTAAGATCGAGAACTTCAAAGGGGCTGGTCTTCTGCTCGACCAAGTTCAGGATGGTTACTTCAACTTCCTGGAAGTGCAAGTCTGCGGACGTACCTCAGGGGACTATGGCGTTTACGCTGATCTGGTTAACTTGAGCAAGACTCAATTCGCACCAATCCACATCATCTCCAGTAAGTCAGGCGATGCATCTAACATGTTGCGTTTCCAAGGCGGCCAGTGGGAAGCTAATAACTGTTCCCCTACTGTCTACTATCGTGGCGGTATTGGTCTGTGGATCTCCAAGATCCACTGCGAACAACGTAACGGTCCGATGAGTAAGTTTAAACTCTACGATCCTAACTTTGTCATGGACACCAGTCCTGAGAAAGCGGGTCGTGTGTTTATCCAAGTAGACGGTTCCAGTTCATCTGAAGTCATGTTGGATCAGATGCAGTCTTCTGAAACCGAACGTTTCGTTTACGCCGGTGGTTACGGTGTGGTCATGATCACGAACACAACGCGAGGGGGCGGTATTTGTTTAGCCTCTGCCAACCGTGAGTTTGCCATGACCATTACCAATAGCTGGTTGACCGACTGCTACTTTGGCCCGTCTTCTCGGGTATGGATCGACAACTGTCGTCTTGGTAACCTGACCTGGTCTTACCCGTCTTATACTGGACTGATTTCCAACACCATGATGAAAGACGTCGTCATGAACAACGATGGCTCTTTCCCGGATATCAACTTCAACAACTGTATCTTCGATAACTTCACTAACTACGTGAAGAACGTTCGTGTTACTGGCGGACACTGTAAAGGTAACTTCTCCTTCAACGCCTCTGGCGGCGGCGGTGCAGTAATCGGTACAGTTATTGATGGTACGTTGAGTGTTGATACCAAGTGGGGGATTGACTTCCGTCCTTCTGGCGCGGTGATGAACCAAGTTTACTCAAATAACGCCCCTACTGAACAAGCACCTAACGGCACTCGTCCAAACGGATCTATCTGGATTAACAAGAACGTAGTTGCCAACGCACCTGACGGTACACCGTTCTCTTGGGTTAAGGATGCTGCTGGTAAATGGGTACCGTACGCTTTCACTGGTGCCTTTGCTAACGGCGTGGTGGCGAAAGAATACACCTTCGCTAATCTACCAGCCCCATCTAGCTGCAAACGTGCGATTGTTACCTGCACTGACTCAGCGAAAACGCCTAAAGACCAACTGGTTTATTCTGATGGCGCTAACTGGCGTTACGTGGCCGATCCTGCCACTGTAGTAACTAAAGGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
7a1ecc777b02b5d93c68d150d4ae98f1c4b7b86036fa7d5ad1cc799e2490cf46
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8019
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50