Protein

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Genbank accession
WVO01531.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MIPFARILTYGNIREIPYIKQMNLSFSSNVSYSILLSTGDAYVGGYNAYGQLGLGHKSDRPRSLFKIPESDIKLCTNGIGSTIYISHDDKIFLSGDRAIQNNSGTASGYTTFTDISNLFSSINISDIKKIVPENNTFVLLNNGELYGIGLNRYGELGVGSTGYFPLTLIDTDVEDCSITSQNSVYIKKDGTVWGAGRNASYCIKTSTEGGINNENIVRFHRMFSTVSEPILQVRMSTNNTIAYTKSTAYCIGTNSAGAFGDGNTTNTNQNTSGNMITVELPKSCNDYNYFGKVYTMHSGVSMYVDINNRLYSTGNNYNYALGLGTSPQYIGTYTIVPDIICKEHDIIICNYYNGYMQG
Physico‐chemical
properties
protein length:358 AA
molecular weight: 39335,58350 Da
isoelectric point:5,96096
aromaticity:0,11173
hydropathy:-0,23492

Domains

Domains [InterPro]
IPR009091
STR
24–216
IPR009091 IPR009091
IPR009091
STR
30–337
IPR009091
IPR009091
STR
31–337
IPR009091
IPR000408
STR
39–88
IPR000408 IPR051553
WVO01531.1
1 358
Architecture
STR
STR 24-340 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WVO01531.1
1 358
Domain Start End Length (AA) Confidence
N-terminal 1 180 180 0,0215
Central domain 181 347 168 0,4002
C-terminal 348 358 10 0,4940
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-180
Central
181-347
C-terminal
348-358

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PHA46
[NCBI] 		3117424 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhimurium str. ATCC 14028
[NCBI] 		1299114 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WVO01531.1 [NCBI]
Genbank nucleotide accession
PP191103 [NCBI]
CDS location
range 51784 -> 52860
strand -
CDS
ATGATACCATTTGCTAGGATATTGACATACGGTAATATAAGAGAAATACCATATATCAAACAAATGAATTTAAGTTTTAGTTCTAATGTTTCTTATAGTATTTTATTAAGCACCGGCGATGCCTATGTTGGTGGGTATAACGCATATGGTCAATTGGGGTTGGGTCATAAATCAGATAGACCTAGATCTTTATTTAAAATACCAGAATCGGATATTAAGTTATGTACTAATGGGATTGGAAGTACTATATATATTTCGCATGATGATAAAATATTTTTATCAGGCGATCGAGCAATTCAGAATAACAGTGGTACAGCATCAGGGTATACGACATTTACTGATATCTCTAACTTGTTTAGTTCTATTAATATATCAGATATTAAAAAAATAGTTCCTGAGAATAATACATTTGTATTATTAAACAATGGTGAACTTTATGGTATTGGACTTAATCGTTATGGTGAATTAGGTGTTGGTAGTACTGGATATTTCCCATTGACATTGATAGATACTGATGTTGAAGATTGTTCTATTACTTCACAAAATAGTGTATATATTAAAAAAGACGGGACAGTGTGGGGTGCTGGCAGGAATGCATCATATTGTATAAAAACCAGTACTGAGGGTGGCATTAATAATGAGAATATTGTTCGTTTTCATCGAATGTTTAGTACTGTAAGTGAACCTATACTTCAGGTTAGGATGTCTACTAACAATACGATTGCGTATACTAAGTCAACAGCATATTGTATTGGTACGAATTCAGCCGGGGCATTCGGTGATGGAAATACAACGAATACGAATCAAAATACATCAGGTAATATGATCACCGTGGAATTACCGAAATCATGTAATGATTATAATTATTTTGGTAAAGTATATACAATGCATAGTGGCGTTTCCATGTATGTTGATATTAATAATAGATTATATAGTACTGGAAATAATTATAATTATGCGTTGGGTTTAGGAACATCACCCCAATATATAGGTACATACACTATAGTTCCTGATATAATTTGCAAAGAACATGATATTATTATATGTAATTATTATAATGGATATATGCAGGGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
10e5a75ed36ec5bc777ae656de35fd752e897f535a2253a6631a71e15a6dba69
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8448
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and efficacy of Salmonella phage PHA46 cocktail in the control of Salmonella Newport and Typhimurium internalized into cherry tomatoes Arista-Regalado,A.D., Viera-Segura,O., Aguilar-Montes de Oca,S., Hernandez,L., Gonzalez-Aguilar,D. and Barba-Leon,J. 2024-07 — GenBank