Protein

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Genbank accession
WZP32733.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,63
Protein sequence
MPVVWHCGFNGFINNTMSQGQAGLVITTNNTQAASTAMDSNNMINNVFGRGGNGDQNGGALPLIRYYGRKYTPGGSYVASYVFGRVKPSFFDNSVPCLSNELYQPSTLSDWFAGWEFRIDTLFPNDYATASWRIGFRIGRATHPTYQIGYNVQICPAGINAAETVTLFTVPIAAGQPEKYVEIEWISDTKTLNIYQDDELVSTRPNFTASSMAYGFIMMCELYVGNSFSTTPFFGFEVRDMYIQRILSDADQRLGSSTRVYTFNPVTDDVVQFARPEGFDSNASVVLTPIGSVGTTPAPSVSTAVLSGDVVGQQDLYNVDISKVSTRLASVEAVNIRTMARNPLLGNRQSAAIAKSGATQTQSDKTSKLEQGGLWRFNTLQMVSDPADGSRWTLAKLAGLKVGTKFVA
Physico‐chemical
properties
protein length:408 AA
molecular weight: 44474,46080 Da
isoelectric point:5,80823
aromaticity:0,11029
hydropathy:-0,14755

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WZP32733.1
1 408
Domain Start End Length (AA) Confidence
N-terminal 1 71 71 0,0041
Central domain 72 270 200 0,1389
C-terminal 271 408 137 0,8567
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-71
Central
72-270
C-terminal
271-408

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SAL_R1
[NCBI] 		3134920 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Typhi
[NCBI] 		90370 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Salmonella

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WZP32733.1 [NCBI]
Genbank nucleotide accession
PP504835 [NCBI]
CDS location
range 51384 -> 52610
strand +
CDS
ATGCCTGTAGTATGGCACTGCGGTTTTAATGGTTTTATTAACAATACAATGAGTCAGGGGCAAGCGGGACTGGTTATCACCACTAACAATACCCAAGCGGCGTCCACCGCTATGGACTCTAATAACATGATTAACAACGTCTTCGGGCGCGGAGGAAATGGCGACCAAAATGGCGGGGCGTTGCCCTTAATTCGGTATTACGGGAGGAAATATACACCGGGGGGTAGTTATGTTGCTTCTTACGTTTTTGGCAGGGTGAAGCCCTCTTTCTTTGATAATTCCGTGCCGTGCCTTAGCAACGAATTGTACCAACCATCTACGCTTTCAGACTGGTTCGCAGGGTGGGAATTTCGTATCGATACGTTATTTCCTAATGACTACGCGACCGCAAGCTGGCGTATTGGATTCAGAATTGGCCGTGCGACACACCCTACCTATCAAATCGGGTATAACGTTCAGATCTGCCCGGCAGGCATCAACGCGGCTGAAACAGTTACTCTTTTCACGGTTCCAATCGCGGCGGGACAGCCTGAAAAATACGTGGAAATTGAATGGATCTCAGATACCAAAACTTTGAATATCTATCAGGATGATGAACTGGTTTCCACTCGCCCAAACTTCACGGCGTCCTCAATGGCATACGGTTTTATCATGATGTGTGAACTGTACGTCGGTAACTCGTTTAGCACGACTCCGTTTTTTGGATTTGAAGTACGCGATATGTACATCCAACGTATTCTTTCTGACGCAGACCAACGATTAGGGTCATCCACGCGAGTATATACGTTCAACCCTGTGACGGATGATGTTGTGCAGTTCGCCCGGCCCGAAGGTTTTGATTCTAACGCCTCGGTCGTCCTGACGCCGATTGGGTCGGTCGGCACAACTCCTGCACCGTCTGTTAGTACTGCGGTTTTAAGCGGGGACGTTGTTGGACAGCAAGACCTGTATAACGTAGATATTTCAAAAGTTAGCACTCGTCTGGCATCGGTAGAAGCGGTTAACATCCGAACGATGGCCCGAAACCCGTTGCTAGGGAACCGCCAGTCAGCCGCGATCGCTAAATCCGGGGCGACACAAACCCAAAGCGATAAAACTTCGAAACTCGAACAGGGCGGTTTATGGCGGTTTAATACGCTGCAAATGGTGTCAGACCCTGCCGACGGATCACGCTGGACGCTTGCTAAATTGGCCGGGCTTAAAGTCGGTACCAAATTCGTCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c2ef0f1eb2ce33112eec31a3f8d36c211bc1033dd4d579c4e661d5f7feb8941
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5987
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Introducing a Breakthrough in Combatting Typhoid fever: Discovery of a Salmonella Typhi Phage SAL_R1 for diagnosis and therapy Sultana,M., Hossain,M.A., Hassan,M.H., Rahman,M.A., Hossain,A., Rahman,A. and Afrin,S. 2016-11-03 — GenBank