Protein

View in Explore
Genbank accession
APU00416.1 [GenBank]
Protein name
tail connector protein
RBP type
TSP
Evidence RBPdetect
Probability 0,84
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MNKSQEAAPLLRPLITTEGLKAAVQASTLGVPVKIVKVGITATPGEATVDDTSLPGAQMLDVADGRLVNSHQVNISTLLPDTFPSMGIAGIAFYLEDGTMFAVYREPEAFLDHTGGTTLLVGMDLVMDNIPSDSVIVESTDANLILGDWVPVERTVNGKALTGDIALTPADVKAVSLTGDRMAGKLEWIDANRYITAAGSDLYVAAKAGKVIIEGKTGPVARVSGQDFDVIHTGNLPKTDLSGYVPTGRKVNGKPLTDDIELNAADVNAVGKTGPQSMTGQLNGVKFTATNNYAFVSNLRQNHGLYLGMNDNDRRTLIGGGGAEVGDKLGTIHLRPGGITDQTGEVVVTVDGNVLAPTDPSASGHLTHKGYVDKAAAAIKDLFKEYVPLSGAILTGALTAKATLKGAFKLQDKASVSYQDGGNAVFHTFASGNTLQVGHGNDGSLFLARFVSDGSFESAGRMLAQTTVTAVSPNKAKTITIEAPDAGDPYLASRGTGEATGTRALTLGKDEVYCHKRLAANTMRVTDDAGLKFGATVDGAGKSWGVGMNPAGTFGFHIYDNNVWKQAPLQLSQGLVSVNGNLSATGSLSATGYSTIVSPGNNILEFHQPGRNATMVYMPDGTGSVRFASSNGAGGESAGYGEIGAFGFRCFNKFSAEWNNARSWHSWGYASLWAGNRPAAGDGHLFGLVSQQLTSPAGGYQVEMFYGQQTYNDLNRSAHIFAAQGDGYLKAWELNNGGQITSPGGWRIATNGDLYSPRLGSQNIVDWCVSSFSPKTHSHTAAEGNLSMVQGRHSEVGTYMFAALHVNAGGPYNPGRQVPGNLLYPAACGEWSQNRGLTFPGTWMCCGYVDPNNDDRYDDRSTLWFRVA
Physico‐chemical
properties
protein length:868 AA
molecular weight: 91451,21210 Da
isoelectric point:5,76486
aromaticity:0,08180
hydropathy:-0,18940

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
APU00416.1
1 868
Domain Start End Length (AA) Confidence
N-terminal 1 290 290 0,8034
Central domain 291 489 200 0,1851
C-terminal 490 868 378 0,9258
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-290
Central
291-489
C-terminal
490-868

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage 3
[NCBI] 		1932897 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Aeromonas salmonicida
[NCBI] 		645 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
APU00416.1 [NCBI]
Genbank nucleotide accession
KY290947 [NCBI]
CDS location
range 15699 -> 18305
strand +
CDS
ATGAATAAATCACAAGAGGCCGCCCCGCTGTTGCGGCCCTTAATCACCACTGAGGGCTTGAAGGCTGCCGTTCAGGCCTCCACCCTTGGTGTGCCTGTGAAGATAGTCAAGGTAGGTATCACGGCCACTCCGGGCGAGGCAACGGTTGATGATACCTCCCTGCCGGGTGCCCAGATGTTGGACGTTGCAGACGGTCGCCTCGTGAACAGCCATCAGGTAAACATTTCAACCCTGTTGCCTGACACCTTCCCCTCCATGGGAATTGCGGGGATCGCCTTCTACCTTGAAGACGGCACCATGTTTGCAGTGTACCGGGAGCCCGAGGCTTTCCTTGATCACACTGGCGGAACCACCCTCCTCGTGGGCATGGATTTGGTGATGGACAACATCCCGTCCGATTCGGTCATTGTGGAGAGCACTGACGCAAACCTGATTTTGGGTGACTGGGTTCCGGTAGAGCGCACAGTCAATGGCAAGGCATTGACCGGTGACATCGCCCTTACCCCCGCTGATGTGAAGGCCGTTAGCCTGACTGGCGACAGGATGGCGGGTAAGCTGGAGTGGATTGATGCCAATCGCTACATCACCGCCGCCGGTTCTGATCTGTATGTGGCAGCCAAAGCAGGCAAGGTGATAATTGAGGGCAAGACGGGCCCGGTAGCTCGGGTAAGTGGGCAGGACTTTGACGTGATCCACACCGGCAACCTGCCCAAGACCGACCTCTCTGGTTACGTGCCAACCGGCCGCAAGGTGAACGGCAAGCCCCTGACTGATGATATCGAGCTGAATGCGGCGGATGTGAATGCAGTCGGCAAGACCGGGCCTCAGTCCATGACGGGTCAGCTGAACGGGGTCAAGTTCACGGCAACGAATAACTACGCCTTTGTGAGCAACCTTCGCCAGAATCACGGCTTGTATCTTGGGATGAACGATAATGACCGGCGAACCCTGATAGGTGGTGGTGGTGCTGAGGTAGGAGACAAGCTGGGAACCATCCACTTGCGACCCGGTGGCATTACCGATCAGACTGGTGAGGTAGTTGTTACCGTTGATGGCAATGTACTGGCCCCAACCGATCCATCAGCCTCTGGGCACCTGACCCACAAGGGGTATGTTGACAAGGCAGCCGCCGCCATCAAGGATCTGTTTAAGGAATATGTGCCCCTGTCTGGTGCAATCCTGACCGGCGCACTCACGGCTAAGGCAACATTGAAGGGGGCCTTCAAGCTGCAAGATAAGGCGTCAGTGTCTTATCAGGACGGCGGAAACGCAGTGTTCCATACGTTCGCCTCTGGCAACACGTTGCAGGTTGGGCATGGCAATGACGGTTCACTCTTCCTCGCCCGCTTTGTAAGCGATGGATCGTTTGAATCGGCAGGCCGAATGCTGGCGCAAACTACCGTCACGGCTGTCTCGCCCAACAAGGCAAAGACAATCACGATAGAGGCCCCTGACGCTGGCGATCCGTATCTTGCCTCTCGCGGCACTGGTGAGGCGACAGGCACCCGCGCTCTGACCTTGGGGAAGGATGAAGTTTACTGCCACAAGCGACTGGCAGCTAACACGATGCGGGTTACTGATGATGCGGGTCTGAAATTTGGCGCTACGGTTGATGGGGCTGGGAAGTCTTGGGGTGTAGGGATGAACCCTGCGGGAACCTTCGGATTCCACATTTATGATAACAACGTCTGGAAGCAAGCGCCGCTCCAGCTGTCCCAAGGATTGGTTAGCGTCAACGGGAATTTGTCTGCCACCGGGTCACTGAGCGCCACCGGGTATTCCACGATTGTGAGCCCCGGAAACAACATTCTCGAATTCCATCAGCCGGGCCGGAATGCGACAATGGTTTACATGCCGGATGGCACCGGAAGTGTCAGGTTCGCCTCAAGTAACGGTGCAGGCGGAGAATCCGCTGGTTACGGTGAAATCGGCGCTTTCGGGTTCCGCTGTTTCAACAAGTTCTCCGCTGAGTGGAATAACGCCCGCTCTTGGCATAGCTGGGGTTATGCCTCGCTCTGGGCTGGTAATCGCCCAGCCGCTGGTGATGGTCACTTGTTCGGCCTTGTTAGTCAGCAGCTGACAAGCCCGGCCGGTGGCTATCAAGTTGAAATGTTTTACGGGCAGCAGACCTATAACGACCTGAACCGCTCTGCTCACATCTTTGCCGCTCAAGGTGATGGTTACTTGAAGGCGTGGGAGTTGAATAACGGTGGTCAGATCACGTCACCCGGTGGTTGGCGCATAGCGACAAACGGTGATCTGTACTCGCCCCGTCTCGGAAGTCAGAATATCGTTGATTGGTGTGTATCGTCATTCAGCCCCAAGACGCACTCCCATACGGCAGCCGAGGGCAACCTCTCCATGGTTCAGGGCCGCCATAGTGAAGTGGGCACCTACATGTTTGCAGCGCTTCACGTTAACGCTGGTGGCCCTTACAATCCGGGGCGGCAAGTGCCGGGCAACCTGCTCTATCCTGCGGCGTGTGGTGAGTGGTCGCAAAACAGGGGCTTGACTTTCCCCGGCACTTGGATGTGCTGTGGCTATGTTGACCCGAACAACGATGATCGTTACGATGACCGCTCAACCCTGTGGTTTCGTGTAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c186d536d856dd1f76b858f7e8e83f1fbc6fe80e47100e6b27e147fee5bfb62e
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2858
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization and diversity of phages infecting Aeromonas salmonicida subsp. salmonicida Vincent,A.T., Paquet,V.E., Bernatchez,A., Tremblay,D.M., Moineau,S. and Charette,S.J. 2017 28765570 GenBank