Protein

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Genbank accession
AXY81865.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,64
Protein sequence
MGLISQSIKNLKSGISQQPDILRFPEQGEAQVNGWSSETKGLMKRPPTIFDRAVDISSSLGAKPLVHAINRDENEKYHIVFTGSSIRALTMDGRNVPVNIDAGMQSYITTPNPRDDLRMVTVADYTFITNTNVVVRSANAINDPGFNELNDALVYVKGGQYGRTFTVIINGNVGSFTTPDGVGEDGKEVAAMVKQTDAQFIVQKLIENLRAQSGLAGWNFGEGPGYIHCIAPNNGSITEITVRDGFAGQLASAVTHQVQSFAKLPLEAPNNYIVKVVGDTSKSTDAFYVRFDARAKIWKEVLGWKSQARIDANTMPHVLIRQADGSFRFTTYSWWDKTCGDDLTNPFPSFVDSTIRDIFFFRNRLGFLSGENIILSRTGGYSRFFPASVANLSDDDPIDVAVSHNRISVLKYAVPFSEQLLLWSDSAQFVLSASDSVLSAKSVSLDLSTEFDVSWRARPCGLGRGVYYTSPRAAYSTINRYYAVQDVSDVKNSEDITSHCPSYIENGVFSIQGSTTENYVSVLTEGAKNRIYMYKFLYLDETVRQQSWSHWEFPADVEILAATPIGSTLYILARNAVHFYACHVNFTKDTIDFVGEPYQLYMDLKTPYTIPAGNYDADKYRTKISFGDVYKMLIRYGTIMLVDTTGATYYFKAPNADGSWPGDNPELWMDGDWSNRQVFIGRAIPFYYQFSKFLIKTTDQNGFVQTQDLGRLQLRRSWLNYVESGSFDVEVTNASRTFTYNMTGKKLGDRHMVLGNLNVATGQFRFPCPGEANSLTVAIRSEAPTALNVVGCGWEGNFINRAQGI
Physico‐chemical
properties
protein length:805 AA
molecular weight: 89649,73220 Da
isoelectric point:5,87069
aromaticity:0,11801
hydropathy:-0,24137

Domains

Domains [InterPro]
IPR058003
TTP
1–805
IPR058003
AXY81865.1
1 805
Architecture
TTP
TTP 1-805
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXY81865.1
1 805
Domain Start End Length (AA) Confidence
N-terminal 1 138 138 0,9833
Central domain 139 337 200 0,2613
C-terminal 338 805 467 0,2684
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-138
Central
139-337
C-terminal
338-805

Taxonomy

  Name Taxonomy ID Lineage
Phage Dickeya phage Luksen
[NCBI] 		2320192 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Aarhusvirus
Host Dickeya solani
[NCBI] 		1089444 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXY81865.1 [NCBI]
Genbank nucleotide accession
MH807815 [NCBI]
CDS location
range 24273 -> 26690
strand +
CDS
ATGGGACTCATTTCGCAGTCAATTAAAAACCTTAAGTCTGGCATTAGTCAGCAGCCGGATATCCTTCGGTTCCCAGAGCAGGGAGAGGCTCAGGTCAATGGGTGGTCAAGTGAGACGAAAGGACTCATGAAGAGACCTCCAACTATCTTTGACAGAGCTGTTGATATCAGTTCATCTCTGGGTGCAAAGCCTCTGGTCCATGCTATCAACCGTGATGAAAACGAGAAGTACCATATCGTCTTTACGGGTAGTTCTATCAGAGCCTTGACAATGGATGGACGTAATGTTCCTGTGAATATTGATGCTGGTATGCAATCCTATATCACCACTCCAAATCCACGAGATGACCTGAGGATGGTCACAGTGGCGGACTATACGTTCATCACTAATACCAACGTTGTGGTGCGTTCAGCTAACGCTATCAATGACCCCGGATTTAATGAGCTTAATGACGCCTTAGTGTATGTTAAAGGCGGTCAGTATGGACGAACATTTACGGTGATTATCAATGGTAACGTTGGGTCCTTTACGACTCCTGATGGTGTTGGTGAGGATGGCAAAGAGGTAGCCGCAATGGTGAAGCAGACGGATGCTCAGTTCATCGTTCAGAAGCTCATTGAGAACCTCAGAGCACAGTCTGGCCTTGCAGGATGGAACTTTGGTGAAGGACCCGGATACATCCACTGTATCGCACCTAACAATGGGTCAATCACAGAGATTACTGTGCGTGATGGCTTTGCGGGCCAGTTGGCTTCCGCTGTTACTCATCAGGTTCAGAGCTTCGCTAAGCTTCCTCTTGAGGCTCCTAATAACTATATCGTCAAGGTTGTTGGAGACACCTCAAAGAGCACTGATGCATTCTACGTAAGGTTTGATGCTCGTGCTAAAATCTGGAAGGAAGTCTTAGGGTGGAAGTCTCAGGCTCGCATTGATGCCAACACTATGCCTCACGTTTTGATTCGTCAGGCTGATGGCTCGTTCAGGTTCACTACGTACTCATGGTGGGATAAGACCTGTGGTGATGACCTGACCAATCCCTTCCCAAGCTTTGTAGACAGCACTATTCGTGATATCTTTTTCTTTAGGAACCGCTTAGGGTTCTTGAGCGGTGAGAATATCATCTTGAGTCGTACTGGCGGTTATAGTCGCTTCTTCCCGGCCTCAGTGGCAAACCTATCAGATGATGACCCGATTGATGTGGCTGTATCACATAACCGTATCTCAGTCCTGAAGTACGCTGTGCCGTTCTCAGAGCAGCTCTTACTGTGGTCTGACTCAGCTCAGTTTGTTCTCTCAGCGTCTGACTCAGTGCTGTCCGCTAAGTCTGTCTCACTGGACCTCTCAACGGAGTTTGATGTGAGCTGGAGGGCCAGACCTTGTGGATTAGGACGTGGTGTTTACTATACGAGTCCACGAGCTGCATACTCTACAATCAACCGTTACTATGCGGTACAGGATGTGAGTGACGTCAAGAACTCTGAGGATATCACGAGCCACTGTCCGAGTTACATTGAGAACGGAGTGTTCAGTATCCAAGGGTCCACTACTGAGAACTATGTGTCTGTGCTTACTGAGGGCGCTAAGAATCGCATCTACATGTACAAGTTTCTGTATCTGGATGAGACCGTTCGTCAGCAGTCATGGAGTCATTGGGAGTTCCCGGCAGACGTTGAGATTCTTGCAGCTACACCTATTGGCTCAACACTCTACATTCTGGCCCGTAATGCTGTTCACTTCTATGCGTGCCATGTGAACTTCACTAAGGACACTATCGACTTTGTGGGAGAACCTTATCAGCTCTATATGGACCTCAAGACTCCATACACCATTCCAGCAGGTAACTACGATGCTGATAAGTACCGGACCAAGATTTCATTTGGTGACGTCTATAAGATGCTCATTAGGTACGGAACTATCATGTTGGTGGATACCACTGGCGCTACCTATTACTTCAAGGCTCCTAACGCTGATGGTAGCTGGCCCGGTGATAACCCTGAGCTGTGGATGGATGGTGATTGGTCAAACAGACAGGTGTTCATTGGGAGAGCCATTCCGTTCTATTATCAGTTCTCTAAGTTCCTCATTAAGACAACTGACCAGAACGGATTCGTTCAGACTCAGGACTTAGGTCGCCTACAGCTTCGTCGCTCATGGTTGAACTATGTGGAGTCAGGTAGCTTTGACGTTGAGGTTACCAATGCATCACGGACATTCACTTACAACATGACCGGTAAGAAACTTGGAGACCGACACATGGTCTTAGGGAATCTTAATGTTGCTACAGGTCAGTTCAGGTTCCCTTGTCCGGGTGAAGCTAACAGTCTTACCGTGGCTATCCGCTCAGAGGCTCCTACAGCTCTCAATGTGGTTGGCTGTGGTTGGGAAGGTAACTTTATCAACAGAGCACAAGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6d89c6292801eab12a164bf80537cc393862b93029d4e6a6719b081762f1c195
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2902
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50