Protein

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Genbank accession
UES35581.1 [GenBank]
Protein name
tail sheath protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MALQSPGIETKETSVQSTVVRNSTGRAAIVGKFSWGPAYQIRQISNEVELVNYFGSPDNLTADYFMSAVNFLQYGNDLRVVRVVDKDAAKNASAIFNQIKTTIASQGSNYTVGDVIKVKYSNTVVEENGKVSQVDSNGKILAVIIPSEKIVARAKQIGTYPDISTGWTTEVVSQSSGVSASITIDGIESDSGITLLNLDIAKETIQGNAFQTLAQKYQIPSVVALYPGELGSTVQVEIISKAAYDTGAMISGFPSGVSVKNSGRSVMTYGPQTDNQYAFVVRRGGIVQESFIVSTDKTDKDIYGVNIYMDDFFANGGSQYVFGTSMNWPKGFSGILEFGGGLSSNDTVGADELMTGWDMFADREALHVPLLIAGACAGETVEISSTVQKHVISIGDERQDCTVFVSPPRSLLVNIPLATAVDNIVEWRTGYKISGGAAVDNNLNVSSSYGFLDGNYKYQYDKYNDVNRWVPLAGDIAGLCVYTDSVANPWMSPAGYNRGQIRNCIKLAIEPRTAHRDAMYQVQINPVTGFAGGSGFVLYGDKTLTSVPSPFDRINVRRLFNMIKKDIGDNAKYKLFENNDDFTRASFRMDTGQYMTNIRALGGCYDYRVICDTTNNTPDVIDRNEFVATVYVKPPRSINYITLNFVATSTGADFDELVGPQAV
Physico‐chemical
properties
protein length:663 AA
molecular weight: 72106,14240 Da
isoelectric point:4,97764
aromaticity:0,09804
hydropathy:-0,14284

Domains

Domains [InterPro]
IPR054564
TAS
24–83
IPR054564 G3DSA:2.40.10.380 DC_1554 IPR035089 IPR020287
IPR054564
TAS
24–85
IPR054564 IPR054565 IPR035326 IPR052042
G3DSA:2.40.10.380
ATT
98–187
G3DSA:2.40.10.380 G3DSA:3.40.50.11780
UES35581.1
1 663
Architecture
TAS
ATT
STR
TAS
TAS
TAS 24-84 | ATT 85-187 | STR 188-511 | TAS 512-544 | TAS 547-648 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UES35581.1
1 663
Domain Start End Length (AA) Confidence
N-terminal 1 95 95 0,9907
Central domain 96 294 200 0,4607
C-terminal 295 663 368 0,2212
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-95
Central
96-294
C-terminal
295-663

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage KKP_3664
[NCBI] 		2875969 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UES35581.1 [NCBI]
Genbank nucleotide accession
OK210075 [NCBI]
CDS location
range 33981 -> 35972
strand +
CDS
ATGGCTTTACAATCTCCAGGTATTGAAACCAAAGAAACATCGGTACAATCTACCGTTGTTCGAAATTCAACTGGTCGCGCTGCCATTGTTGGTAAATTTTCATGGGGGCCAGCTTATCAGATCCGTCAGATTTCTAACGAAGTCGAACTGGTAAACTATTTTGGTTCTCCAGACAACCTAACCGCTGACTATTTCATGAGTGCTGTTAACTTCTTGCAGTACGGTAATGATCTCCGTGTGGTTCGCGTTGTTGATAAAGATGCCGCAAAAAACGCAAGCGCAATTTTTAACCAGATTAAAACAACCATCGCATCGCAGGGTTCTAACTATACCGTAGGCGACGTGATTAAAGTAAAATACAGCAACACAGTTGTAGAAGAAAACGGCAAAGTGTCTCAGGTTGACAGCAACGGTAAAATCCTTGCAGTAATCATTCCGAGTGAAAAAATCGTTGCTCGTGCTAAACAGATCGGCACTTATCCAGATATTTCTACTGGCTGGACGACCGAAGTTGTTTCTCAGTCTTCTGGTGTTTCTGCGTCAATCACAATCGACGGTATCGAAAGCGATTCTGGTATCACTCTGTTGAACCTGGATATTGCTAAAGAAACCATTCAGGGAAACGCATTCCAGACGTTAGCACAAAAATATCAGATCCCGTCTGTTGTGGCTCTGTATCCTGGTGAACTGGGTTCTACTGTACAAGTAGAGATCATTTCCAAAGCGGCTTATGATACTGGCGCTATGATTTCCGGCTTCCCTTCTGGGGTTTCCGTTAAAAACAGCGGTCGTTCTGTGATGACCTACGGTCCACAAACAGACAATCAGTACGCTTTTGTTGTGCGTCGTGGTGGTATTGTACAAGAATCTTTCATCGTGTCAACTGATAAAACCGATAAAGATATCTATGGCGTAAATATCTACATGGATGACTTTTTCGCTAACGGTGGTTCTCAGTACGTTTTCGGTACTTCTATGAACTGGCCTAAAGGCTTCTCCGGTATTCTGGAGTTTGGCGGTGGTCTGTCTTCAAACGACACCGTAGGCGCTGATGAACTGATGACGGGTTGGGATATGTTCGCAGATCGCGAAGCCCTGCACGTTCCGCTGCTGATTGCAGGTGCGTGTGCTGGTGAAACCGTAGAAATTTCTTCCACTGTTCAGAAGCACGTTATCTCAATCGGTGACGAACGTCAAGACTGTACTGTTTTTGTTTCGCCTCCGCGCTCTCTTCTGGTGAACATTCCGTTGGCAACTGCGGTTGATAACATCGTTGAATGGCGTACTGGCTACAAAATCTCAGGCGGTGCTGCTGTAGATAATAACCTGAACGTAAGTTCGAGCTATGGCTTCCTGGATGGTAACTATAAATATCAGTATGATAAATACAATGACGTGAACCGTTGGGTTCCGCTGGCAGGTGATATTGCTGGCCTGTGTGTTTACACTGATAGCGTTGCTAACCCGTGGATGTCTCCGGCTGGTTATAACCGTGGTCAGATCCGTAACTGTATTAAACTGGCTATTGAACCGCGTACAGCACACCGTGACGCGATGTATCAGGTTCAGATTAACCCGGTAACTGGTTTTGCAGGTGGCTCTGGTTTCGTTCTGTACGGTGATAAAACACTGACTAGCGTTCCGAGTCCGTTCGATCGCATTAACGTTCGTCGCTTGTTCAACATGATCAAGAAAGACATTGGCGATAACGCGAAGTACAAACTGTTCGAAAACAACGACGATTTCACCCGTGCTTCGTTCCGTATGGATACTGGTCAGTACATGACGAATATTCGTGCGCTGGGTGGTTGCTATGATTACCGTGTAATCTGTGACACCACGAACAACACACCGGACGTAATCGATCGTAACGAGTTTGTAGCGACTGTTTACGTGAAACCGCCGCGTTCTATCAACTACATCACTCTGAACTTCGTAGCAACGTCTACAGGCGCAGATTTCGATGAATTGGTAGGCCCACAAGCCGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b42eb2d122dabf716c8938821a834e43c524254852a5213a0d36c29519fc1af7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7844
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of lytic bacteriophages against saprophytic bacterial microflora of minimally processed plant-food products Wojcicki,M., Srednicka,P., Swider,O., Blazejak,S., Gientka,I., Kowalczyk,M. and Juszczuk-Kubiak,E. 1978 — GenBank