Protein

View in Explore
Genbank accession
QXV74303.1 [GenBank]
Protein name
tail fiber protein host specificity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 0,97
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MSLHVKQAGAWSTVQNLYVNQSGVWVPVQYAYVKNAGAWVQYYSSEVVVTLAANTNNVNISTLFTSAVWTSSTNKRVVINSGVTIGSTSSGTPAMRTGVSWGGLLTIENAGTIQGAGGAGNSGAGGHALIADASGVIVKNTGIIRSGGGGGGHGGNGGNGYYTYTISEGPAYAGYPANGSSRYYWQTQNGTSIDSAYWNNANLFGGNVDSPVTVNGFTYTRGAQRASYTSGSSSFNVFEISRSYQATAYTSGGTGGDGGRGQGADGSAAAGSAGSGGGTNAGTGGTGGTGGAYGANGSTGNSGSAGNNGSGTAGTTGGIAGISYNVANISMTNTGTITGRTS
Physico‐chemical
properties
protein length:342 AA
molecular weight: 33592,65010 Da
isoelectric point:9,17529
aromaticity:0,09064
hydropathy:-0,23041

Domains

Domains [InterPro]
DC_1762
ATT
1–160
DC_1762 DC_0422
IPR007932
RBD
46–207
IPR007932
QXV74303.1
1 342
Architecture
ATT
RBD
ATT 1-160 | RBD 161-342
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV74303.1
1 342
Domain Start End Length (AA) Confidence
N-terminal 1 59 59 0,1335
Central domain 60 265 207 0,9570
C-terminal 266 342 76 0,1210
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-59
Central
60-265
C-terminal
266-342

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph15
[NCBI] 		2836131 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV74303.1 [NCBI]
Genbank nucleotide accession
MW980065.1 [NCBI]
CDS location
range 40268 -> 41296
strand +
CDS
ATGAGCCTGCATGTAAAGCAAGCAGGAGCATGGTCCACAGTGCAGAACCTGTACGTCAACCAATCTGGCGTATGGGTTCCTGTACAATACGCGTATGTAAAGAACGCGGGCGCATGGGTGCAATACTATTCGTCGGAAGTAGTCGTTACTCTAGCGGCGAACACCAATAACGTCAACATATCGACGTTGTTCACCTCTGCGGTATGGACTAGCTCAACGAACAAGCGTGTCGTCATTAACTCTGGCGTCACCATTGGCTCTACCTCATCTGGCACTCCCGCAATGCGTACGGGTGTAAGTTGGGGCGGGCTACTGACAATCGAGAATGCCGGTACTATCCAAGGTGCTGGCGGTGCTGGCAACTCAGGTGCTGGCGGTCATGCACTGATAGCTGATGCATCAGGAGTAATCGTCAAGAATACCGGCATTATCCGCTCTGGCGGTGGTGGTGGTGGTCACGGCGGTAACGGTGGCAATGGCTACTACACCTACACCATATCGGAGGGACCGGCTTATGCTGGTTATCCGGCGAACGGCAGCAGCCGTTACTACTGGCAAACTCAGAACGGCACAAGCATCGACAGCGCGTACTGGAACAATGCCAACCTATTCGGCGGTAACGTAGACAGTCCGGTTACGGTTAATGGTTTCACGTACACTCGCGGCGCACAGCGCGCAAGCTATACGAGTGGAAGTAGCTCATTCAACGTATTCGAAATCAGCCGGTCGTACCAAGCCACAGCCTACACTTCGGGTGGTACAGGTGGCGACGGCGGGCGCGGCCAGGGCGCAGACGGATCGGCAGCAGCCGGTTCTGCGGGTTCCGGTGGCGGCACTAATGCTGGTACTGGCGGTACTGGCGGAACGGGTGGAGCGTATGGCGCGAACGGCTCAACGGGCAATAGCGGCAGTGCTGGCAATAACGGCTCTGGTACAGCCGGAACTACCGGCGGCATCGCTGGTATTAGCTATAACGTTGCTAACATTAGCATGACAAACACAGGCACAATCACGGGACGAACATCATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a2baa8c1b6abfec0e613a73b406f5fd7e7443e791df3d795c55363903085d9d7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7800
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank