Protein

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Genbank accession
AUV56907.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MALNFTTITENNVIRDLTIQVNNIGEELTKERNIFDITDDLVYNFNKSQKVKLTDDKGLSKSYGNITVIRDIKEPGYYYINARTLATLLDKPDMESIDVLLHVLPLDSSTRVVQHIYTLSTNNNQIKTLYRFVSGNSSSEWQFITGLPSNKNAVISGTNILDISSPGIYFVMGMTGGMPKGVSSGFLDLNIDANDNRLAKLTDSETGKEYTSIKKPTGVYTEWKKELEPQDMQKYLLSSIRDDGSASFPLLVYTSDNKTFQQAVIDHIDRTGQTTFTFYVQGGVTGSPMSNSCRGLFMSDTPNTSSLHGVYNAVGTDGRNVTGSVVGSSWTFPKTSPSHKELWTGAQSFLSTGTTKNLADDISNYSYVEVYTKHKTSEKTKGNDDTGTICHKFYLDGSGTYVCSGTFVSGDRTDTKPPITEFYRVGVSFKGSTWTLVDSAVQNSKTQYVTRIIGINMP
Physico‐chemical
properties
protein length:458 AA
molecular weight: 50629,05370 Da
isoelectric point:6,01961
aromaticity:0,09607
hydropathy:-0,40262

Domains

Domains [InterPro]
DC_1773
STR
9–247
DC_1773 IPR057110
DC_0448
STR
195–457
DC_0448
AUV56907.1
1 458
Architecture
STR
STR 9-458
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUV56907.1
1 458
Domain Start End Length (AA) Confidence
N-terminal 1 218 218 0,6973
Central domain 219 417 200 0,0357
C-terminal 418 458 40 0,9964
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-218
Central
219-417
C-terminal
418-458

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_SauM_LM12
[NCBI] 		2070179 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUV56907.1 [NCBI]
Genbank nucleotide accession
MG721208.1 [NCBI]
CDS location
range 60960 -> 62336
strand -
CDS
ATGGCATTAAATTTTACTACAATAACGGAAAACAATGTTATTAGAGACCTGACTATTCAGGTCAATAACATTGGAGAAGAATTAACAAAAGAAAGAAATATATTTGACATTACGGATGATTTAGTTTATAATTTTAATAAATCACAAAAAGTTAAATTAACAGATGATAAGGGTTTATCTAAATCTTATGGGAATATAACTGTAATTAGGGATATAAAAGAACCAGGTTATTATTATATAAATGCAAGAACATTAGCTACATTATTAGATAAACCTGATATGGAATCAATAGATGTTTTACTTCATGTACTACCTTTAGATTCATCTACTAGAGTAGTACAGCATATATATACATTGTCTACTAATAACAATCAAATTAAGACATTATATAGGTTTGTTTCGGGAAACTCTAGTTCAGAATGGCAGTTTATAACTGGATTACCTAGTAATAAAAATGCTGTTATTTCAGGAACTAATATCCTGGATATATCTTCACCAGGTATTTACTTTGTTATGGGAATGACAGGAGGAATGCCAAAAGGTGTAAGTTCGGGATTTTTAGATTTGAATATAGATGCTAATGATAATAGATTAGCTAAGTTAACTGATTCTGAAACAGGTAAAGAATACACTAGTATTAAAAAACCTACAGGTGTATACACAGAGTGGAAAAAAGAATTAGAACCTCAAGATATGCAAAAATATTTATTAAGTAGTATCAGGGATGATGGTAGTGCATCTTTCCCATTACTTGTGTACACTAGTGATAATAAGACTTTTCAACAGGCTGTTATAGACCATATAGATAGAACAGGGCAAACAACCTTTACCTTTTATGTTCAAGGTGGTGTGACAGGTTCTCCTATGTCTAATAGCTGTAGAGGATTATTCATGTCAGATACACCTAATACATCTAGTTTACATGGTGTTTATAATGCAGTAGGTACTGATGGTAGAAATGTAACAGGCTCAGTAGTAGGTAGTAGTTGGACTTTTCCTAAAACATCACCGTCACATAAAGAATTATGGACGGGAGCACAATCATTCTTATCCACAGGTACTACTAAGAATTTAGCAGATGATATTAGTAATTATTCTTATGTAGAAGTTTATACTAAACATAAGACATCAGAGAAAACTAAAGGTAATGATGATACAGGTACAATTTGTCATAAATTTTATCTAGACGGTAGTGGTACCTACGTTTGCTCAGGTACATTTGTATCAGGAGATAGAACCGATACAAAACCACCAATTACAGAATTTTATAGAGTAGGTGTATCCTTTAAAGGTTCAACATGGACTCTTGTAGATAGCGCAGTGCAAAATAGTAAAACTCAATATGTTACAAGAATTATAGGTATTAATATGCCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
115e3ccaaeefb239b7ed11e631f7105a4f58ab7ec2f3eac106e216bcdbb3bf20
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8019
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A new phage endolysin active against S. aureus biofilms Melo,L.D.R., Brandao,A., Akturk,E., Santos,S.B. and Azeredo,J. 2018-04-07 — GenBank