Protein

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Genbank accession
UWJ03870.1 [GenBank]
Protein name
tail tube B
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MARVAAQLSNFTAGELSPRLDGRNDLAKYSAGCATVENMVIYPHGAAARRPGTTYVAEVRDSSKSTRLIPFEFSTTQTYILEFSDQKIRFYRDNGQILSSGSPYEITSPYLEAELFDIKFAQSADIMYITHPSHKTRKLSRTGHTSWTLAEVDFTNGPFLDSNITSTTLTPSAAGTGSRTITASAVTGINGGSGFLTTDVGRQIHFNDGYGTITARTNTTVVTVNVTTAFANANPITNWFLGAFSDTTGHPACVTFFEQRLVFAATLNNPQTVYLSKSGDYENMDANIGGTVADDDAIIYTIASNQVNAIRFLASTRTLIIGTAGGEFAVTGGGDNNAITPTNIMIKKQSNHGAANVDGISVGNATLFLQRAKRKIRELAYNFDVDGYTAPDLTILAEHITEGGIVEMAYQEEPLAIIWCVRGDGELVALTYQREQEVVAWHRHVFGGAFGTGKAVCESVAVIPTEDSEYELYMIIKRTINGATKRYVEYLNTFDFTETDNTTFNFLDSQLSYSGATSTLNGDISATATTVIVASGTDFTSSGTIKIGGEIITYTGKSTNNLTGCTRGQNITTAIAHTSGATVKQVVNSVSGLNHLEGQVVSILADGATHPTKTVSSNAITLDRFANKIKVGLGYTSLLKTMRIDAGSQNGTSQAKTKRIYEVTARLYESVGVEVGPDLNNMERVPFRTSANPMDQGIPPFTGDKEVEFRGDYDTDGFMIVRQTQPLPLTILSLYPRLVTNDG
Physico‐chemical
properties
protein length:743 AA
molecular weight: 80158,63330 Da
isoelectric point:5,43025
aromaticity:0,08614
hydropathy:-0,17187

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UWJ03870.1
1 743
Domain Start End Length (AA) Confidence
N-terminal 1 174 174 0,8836
Central domain 175 373 200 0,0925
C-terminal 374 743 369 0,3204
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-174
Central
175-373
C-terminal
374-743

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage Skadi-8 EXVC108P
[NCBI] 		2971106 No lineage information
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UWJ03870.1 [NCBI]
Genbank nucleotide accession
OP131296 [NCBI]
CDS location
range 3208 -> 5439
strand -
CDS
ATGGCTAGAGTAGCTGCACAACTTTCAAACTTTACAGCGGGTGAGTTATCACCAAGATTAGATGGTAGAAATGATTTAGCAAAATATTCTGCTGGATGTGCAACTGTAGAAAATATGGTTATCTATCCTCATGGTGCGGCAGCTCGTAGACCCGGAACAACTTATGTTGCAGAAGTAAGAGATAGCTCAAAATCTACAAGACTTATTCCTTTTGAATTTTCAACTACACAAACTTATATACTAGAATTTAGTGATCAAAAAATTAGATTCTACAGAGATAATGGTCAAATATTATCTAGTGGTTCACCTTATGAAATTACATCACCTTATTTAGAAGCAGAATTGTTTGATATTAAATTTGCACAATCTGCTGACATTATGTACATTACGCACCCTAGCCACAAAACTAGAAAATTATCTCGTACAGGTCATACATCTTGGACATTAGCAGAAGTAGATTTTACTAATGGACCATTTTTAGATTCTAACATTACATCAACAACACTAACACCTTCTGCTGCAGGAACAGGATCAAGAACTATTACAGCATCTGCGGTTACAGGTATCAATGGCGGTTCTGGATTTTTAACAACAGATGTAGGTAGACAAATACATTTTAATGATGGTTATGGTACGATTACTGCAAGAACTAATACTACAGTTGTTACAGTAAATGTAACTACAGCTTTTGCAAATGCTAATCCTATTACTAATTGGTTTCTTGGTGCTTTCTCTGACACCACTGGTCATCCTGCTTGTGTAACTTTTTTTGAACAACGATTGGTATTTGCTGCAACACTTAACAATCCACAAACAGTTTACCTTTCTAAATCTGGTGATTATGAAAACATGGATGCAAACATTGGTGGTACTGTAGCAGATGATGATGCTATTATTTATACAATCGCTTCTAACCAAGTTAATGCAATTAGATTTCTAGCATCAACTAGAACTTTAATTATAGGTACAGCAGGTGGTGAATTTGCAGTTACTGGTGGTGGAGATAATAATGCCATTACCCCTACTAACATTATGATTAAAAAACAATCTAACCATGGTGCAGCAAATGTAGATGGTATATCTGTAGGTAACGCAACATTATTTTTACAACGTGCTAAAAGAAAAATTAGAGAACTAGCTTATAATTTTGACGTAGATGGTTATACAGCACCCGATCTTACCATCCTTGCCGAACACATTACTGAAGGAGGTATTGTAGAGATGGCATATCAAGAAGAACCTTTAGCAATTATTTGGTGCGTTAGAGGAGATGGTGAATTAGTTGCACTTACTTATCAAAGAGAACAAGAAGTAGTTGCTTGGCATAGACATGTTTTTGGCGGAGCATTTGGAACTGGTAAAGCAGTATGTGAATCAGTTGCAGTTATACCAACTGAAGATAGTGAGTATGAACTATATATGATTATTAAAAGAACTATTAATGGTGCTACAAAAAGATATGTAGAATATCTAAACACATTTGATTTTACAGAAACAGATAACACTACATTTAATTTTTTAGATTCTCAACTTTCTTACAGCGGTGCAACATCAACATTAAATGGCGATATTTCTGCAACAGCTACAACAGTTATTGTAGCATCTGGAACAGACTTTACATCATCCGGTACAATAAAAATTGGTGGAGAAATAATTACTTACACAGGTAAATCTACAAATAATTTAACTGGATGTACAAGAGGTCAAAACATAACTACAGCAATAGCTCACACATCTGGTGCAACTGTTAAACAGGTTGTTAATTCTGTATCTGGATTAAATCATTTAGAAGGTCAAGTAGTAAGTATATTGGCTGATGGTGCAACACACCCTACAAAAACTGTATCATCAAATGCTATTACATTAGATAGATTTGCAAATAAAATTAAAGTTGGATTAGGATATACATCATTATTAAAAACTATGAGAATAGATGCTGGTTCACAGAATGGTACATCACAAGCTAAAACAAAAAGAATATATGAAGTTACTGCAAGACTATACGAAAGTGTTGGTGTTGAAGTTGGACCAGATTTAAACAATATGGAAAGAGTACCTTTTAGAACTTCTGCTAATCCTATGGATCAAGGTATTCCACCTTTTACAGGAGATAAAGAAGTAGAATTTAGAGGAGATTATGATACAGATGGATTTATGATTGTAAGGCAAACTCAACCTTTACCTTTAACAATTTTATCACTATACCCAAGGCTAGTAACAAATGATGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
425d67d988fcbb9dcbb36ecc1ddcdf37b3bb67710db70a158c4f9e1adb8b1e1d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9450
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50