Protein

View in Explore
Genbank accession
VFR10296.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,66
Protein sequence
MLTHESSFIFTIDNPYLEKEGDLSTPTSVQRIRNSETLKASVAKIVLETRRYYDWDAIGVWLPPQGYFSDRAIMLSLPNLTLPDSITGKTVGFVIGGILQSGLTMNKLDTTRDYYSSLMLTPDIGCLVMANIGKVKTYPIQSDPVGVRLTGAGNIVRRAKWKEKYRTGVLYNINGQWVPHYTQDFNPDDAHDVVVVCDDDYQSINADVPVETHLCPPGYQGIAIPTLGKGLPKLEFVEAHHLADLQNRTDTLQDWLNTKSHFFEVGLEALGAEYTFYSQYTRTWGTIDVTQPLNTLCAN
Physico‐chemical
properties
protein length:299 AA
molecular weight: 33501,55780 Da
isoelectric point:5,23205
aromaticity:0,10033
hydropathy:-0,23846

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VFR10296.1
1 299
Domain Start End Length (AA) Confidence
N-terminal 1 85 85 0,0117
Central domain 86 284 200 0,0425
C-terminal 285 299 14 0,9943
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-85
Central
86-284
C-terminal
285-299

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage SPFM1
[NCBI] 		2528671 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VFR10296.1 [NCBI]
Genbank nucleotide accession
LR535901 [NCBI]
CDS location
range 83892 -> 84791
strand +
CDS
TTGCTGACGCACGAATCCTCGTTTATCTTTACGATAGACAACCCGTATCTCGAAAAAGAAGGTGATTTAAGTACGCCTACGTCCGTTCAACGTATTCGTAACTCAGAAACGTTAAAAGCTAGCGTGGCGAAGATTGTATTGGAAACCCGTCGCTATTACGATTGGGACGCCATCGGTGTTTGGTTGCCGCCGCAAGGCTATTTCAGCGACCGTGCGATTATGCTGAGTCTGCCAAACCTGACCTTACCCGATTCCATTACAGGGAAAACCGTTGGGTTCGTCATCGGAGGTATTCTGCAATCCGGTTTAACGATGAACAAACTCGATACTACGCGAGATTACTATTCTTCGTTAATGCTTACGCCAGACATTGGCTGTCTGGTGATGGCAAATATCGGTAAAGTAAAGACCTACCCCATCCAATCTGACCCAGTGGGCGTTCGCTTAACCGGCGCTGGTAATATCGTGCGGCGTGCCAAGTGGAAAGAGAAATACCGTACTGGGGTGCTGTACAACATCAACGGCCAGTGGGTACCTCACTACACTCAGGACTTCAATCCTGATGATGCACACGACGTTGTTGTAGTCTGCGACGATGATTACCAGTCTATTAATGCAGATGTGCCCGTAGAAACGCACCTGTGCCCTCCTGGGTACCAAGGAATCGCGATTCCAACGCTTGGGAAGGGCCTACCGAAGCTCGAATTCGTTGAGGCACATCACCTGGCTGATTTACAAAACCGTACGGACACGTTGCAAGATTGGTTAAACACCAAGTCCCACTTTTTCGAAGTAGGACTAGAAGCACTAGGTGCTGAATATACCTTCTATAGCCAGTACACCCGAACTTGGGGAACCATCGATGTCACGCAGCCCTTAAATACCCTTTGTGCTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e9c140c5ac5ee566d55959501ffdf539d9d1f0e01217b39b86ab9dafb8f43418
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2920
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50