Protein

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Genbank accession
AUR98173.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MPDVQPTNNPVPSDHPADARDNFKRIDEVVNLQAAQTSPTRTGRVLNTLYGLEANYNQTPINGGVWAAGIQFTAYNQYMVYQGVAYRPRVSTPLPYTSQAAPNPDFVQPFNYSEEIEPLEARVTLVEGRVSTNESDISALQAGQGSGVVAFATQAELFSNLNFDERTPAYVTNDPTATNNGTYRKVGASGSGSWVQSSNDLASQAYQLATDNQEAITPAVERTAIFDRNKPLNNFVRKNAVGSGFNNNAITTAFYSFRAETSDPILGRSGEDQFTTDARSSVRGDSFSVGTMVGRTVFLGWLEYIDPSQSGVPTSFGSGVQVNNLGVESVFIPDTRGNIQITDDVWLIWAKKLETDPNMSNGHHIVAPVSQYDRSKLAFAHFIAYGDASIAWEDIDIFNQNERDDDFEDHDQYLTATHGRPDWSDATDPVSMVVTDNEIVRGIVPSGHCLARGPSDITQATFKYDFEGDRLNQYWYFSFYAYQPNDDTPSSKRVWNVQSGTKNGNSFVTAKDVRTSSTEYGGGLSRIDVRGKFEDVHSTSYGGWMSIKFSVGSGDCYAFGIIAGVSDSIHDREALTPRYYNASKIVQPIAPDPIETVDSIWRGSKVVWFGTSIPDGSEYPSRVTSNIGATLSDLTRSGGRLGAMPEDTRVPQDNTPQLFNFTFSQSDRDVHYTPNVGQEVDPDNYSVLQPGSGFTLTQSVLDTFMENFFEHRLIGNLDADLYIMDYGTNDVNLNTSSPWVTPANAPDDGTTFAGAFKRLYTYIHASNPLAKWLIVSHHNRTRNQGTRDAVDSQELISHEYGTPLADMATNLGLNNINLTDFIPDELHPPVGGEIDLAYARQITDKLNSL
Physico‐chemical
properties
protein length:849 AA
molecular weight: 93495,39970 Da
isoelectric point:4,64456
aromaticity:0,10483
hydropathy:-0,47562

Domains

Domains [InterPro]
DC_2149
ATT
24–195
DC_2149 SSF52266
SSF52266
STR
597–837
SSF52266
IPR036514
STR
671–848
IPR036514
cd00229
ENZ
704–845
cd00229
AUR98173.1
1 849
Architecture
ATT
STR
ATT 24-195 | STR 595-848 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR98173.1
1 849
Domain Start End Length (AA) Confidence
N-terminal 1 608 608 0,4136
Central domain 609 807 200 0,3847
C-terminal 808 849 41 0,7037
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-608
Central
609-807
C-terminal
808-849

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.247.B._10N.261.54.E12
[NCBI] 		1881442 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio splendidus
[NCBI] 		29497 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR98173.1 [NCBI]
Genbank nucleotide accession
MG592613.1 [NCBI]
CDS location
range 23618 -> 26167
strand +
CDS
ATGCCAGACGTACAACCAACAAATAACCCAGTACCTAGTGATCACCCAGCTGACGCTAGAGACAATTTTAAGCGAATTGATGAGGTCGTTAACCTACAAGCTGCGCAAACATCACCAACAAGAACGGGTAGGGTTTTAAATACCCTGTACGGACTGGAGGCTAATTATAACCAAACGCCAATAAACGGTGGGGTTTGGGCGGCTGGCATCCAGTTTACAGCTTACAATCAATACATGGTCTATCAGGGTGTTGCTTACAGACCAAGAGTTAGCACGCCACTACCTTACACATCACAAGCCGCTCCAAATCCAGATTTCGTCCAGCCTTTTAATTACTCTGAAGAGATAGAGCCTTTAGAAGCAAGAGTGACTCTAGTTGAGGGGCGAGTTTCAACCAATGAGTCTGACATATCAGCACTTCAGGCGGGGCAGGGCTCTGGCGTTGTTGCGTTTGCAACTCAGGCTGAGTTATTTTCAAATCTAAATTTTGATGAAAGAACTCCGGCATATGTAACTAATGACCCAACGGCGACAAATAACGGAACGTACAGAAAGGTCGGCGCGTCAGGCTCTGGATCTTGGGTTCAATCTAGCAATGATTTAGCAAGCCAAGCCTACCAACTTGCTACTGATAACCAAGAAGCAATAACCCCGGCAGTCGAAAGGACGGCAATTTTTGATAGAAATAAGCCTTTAAATAATTTCGTAAGGAAGAACGCGGTTGGAAGCGGATTCAATAACAATGCAATAACAACTGCTTTTTATAGCTTTCGTGCTGAAACGTCTGACCCTATATTGGGGCGCTCTGGAGAAGACCAGTTCACAACAGATGCAAGATCTTCAGTTAGAGGTGACTCATTCTCTGTTGGGACGATGGTTGGAAGGACGGTTTTTTTAGGCTGGCTGGAATACATAGACCCTAGCCAATCTGGAGTGCCTACATCTTTTGGGTCTGGCGTGCAGGTTAATAACTTGGGTGTAGAATCGGTTTTCATTCCTGACACAAGGGGTAATATTCAGATTACTGATGATGTTTGGTTGATTTGGGCTAAGAAGCTAGAGACAGATCCAAATATGTCTAACGGTCACCATATAGTTGCCCCTGTTAGTCAATATGACAGATCAAAGCTAGCTTTCGCTCATTTCATTGCTTACGGCGATGCTAGTATTGCTTGGGAAGATATTGACATATTCAATCAGAACGAAAGAGATGATGACTTTGAAGACCACGACCAATATCTAACAGCTACCCACGGAAGACCCGACTGGTCAGACGCGACCGACCCAGTTTCCATGGTGGTGACGGATAATGAAATTGTCAGGGGTATTGTTCCTTCAGGTCACTGTTTGGCTAGGGGGCCGTCAGACATAACCCAAGCTACATTCAAGTATGACTTCGAGGGGGATAGGCTTAATCAGTATTGGTATTTTAGTTTTTACGCATACCAACCCAACGACGACACACCATCGAGCAAAAGAGTATGGAACGTTCAATCTGGAACAAAGAACGGTAACAGCTTTGTCACCGCTAAGGACGTTAGAACATCATCAACAGAATACGGTGGCGGCCTATCAAGGATTGATGTAAGAGGTAAGTTCGAGGATGTCCACAGCACTAGTTATGGCGGTTGGATGTCAATTAAATTTTCAGTCGGTTCTGGTGACTGCTATGCATTTGGAATTATAGCTGGTGTTTCTGATTCCATTCACGATAGAGAGGCGCTAACGCCAAGGTATTATAATGCTTCAAAGATAGTTCAACCCATAGCACCAGACCCCATTGAAACCGTTGATTCAATATGGCGCGGCAGCAAGGTGGTGTGGTTTGGAACGTCAATTCCTGATGGTTCAGAATACCCTTCTAGGGTAACTTCGAACATTGGCGCTACATTGTCAGATTTAACAAGAAGCGGAGGGAGGCTTGGTGCTATGCCAGAGGATACAAGAGTGCCTCAAGATAACACACCTCAACTTTTCAACTTTACATTTAGCCAGTCTGACCGGGATGTTCACTACACGCCAAATGTTGGCCAAGAGGTTGACCCGGACAATTACTCAGTATTACAACCGGGCTCTGGCTTTACTCTAACTCAGTCGGTTCTTGATACGTTTATGGAAAACTTCTTTGAACATCGATTGATAGGAAATTTAGATGCTGACCTATACATTATGGATTATGGAACAAACGACGTAAATTTAAACACGTCTAGCCCTTGGGTTACACCTGCTAACGCGCCAGATGACGGCACGACCTTTGCTGGTGCATTCAAGAGGTTATATACATACATTCATGCATCCAACCCTTTGGCTAAATGGTTGATAGTGTCTCACCACAATAGAACTAGAAACCAAGGAACTAGAGATGCTGTGGATTCTCAGGAATTAATAAGCCATGAGTACGGGACACCACTAGCCGACATGGCAACAAATCTAGGGTTAAATAACATTAACCTAACAGACTTTATACCGGACGAGCTCCACCCACCTGTAGGTGGCGAGATAGACCTAGCGTATGCTAGACAGATAACAGATAAATTAAATAGCCTCTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
9627255b83ef8f5ab1cdc9b607e1dbee6a7e9ae8d1893e02b40dcc6c522756b1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6024
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank