Protein

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Genbank accession
QQG32110.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MTPLKTKQAIAAATSMIPVYSGATEAQQGIVRLVTLAQLRDPNIREGYSASPFTLNQWQATESNIGAVKISTQTLMNNGTDNNTAVTPLKFVNTRASTTRVGTTKLVTTVNGDNSLALSGGAAVLPSNRAAVSTGGIYETSQTANRKYLHRDDLKSFLPVGSVIMVAFNSDSGNMLICNGRLLATADYPELFQRIGYTYGGSGSQFALPDTRGVFVRGYDAGRGYDAGRVFGSYQADAMQRITANWAIDDQVARSTYPPSGACYADSPGSVNFDLKSDDRKWLGYKIHFDSARQTRTADQTRPRNIAFNYAICVR
Physico‐chemical
properties
protein length:315 AA
molecular weight: 34047,74360 Da
isoelectric point:9,39860
aromaticity:0,08889
hydropathy:-0,30762

Domains

Domains [InterPro]
DC_1413
STR
1–315
DC_1413
IPR037053
ATT
149–212
IPR037053
SSF88874
STR
152–314
SSF88874
IPR011083
ATT
161–216
IPR011083
QQG32110.1
1 315
Architecture
STR
ATT
STR
STR 1-148 | ATT 149-216 | STR 217-315
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage CkP1
[NCBI] 		2799684 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Citrobacter koseri
[NCBI] 		545 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQG32110.1 [NCBI]
Genbank nucleotide accession
MW239124 [NCBI]
CDS location
range 91971 -> 92918
strand +
CDS
ATGACACCATTGAAAACTAAACAAGCTATTGCTGCTGCAACTAGTATGATTCCGGTTTATAGCGGAGCAACTGAAGCACAACAAGGCATAGTTCGTTTAGTTACGCTGGCTCAATTAAGAGACCCTAATATTCGTGAAGGTTATTCAGCATCACCATTTACTTTAAACCAATGGCAAGCTACCGAATCAAATATTGGTGCAGTTAAAATTTCAACTCAAACTTTAATGAATAACGGCACTGACAATAACACCGCTGTTACTCCTTTAAAATTTGTAAATACCAGAGCATCGACTACTCGTGTTGGTACAACTAAATTAGTTACAACTGTTAATGGTGATAATTCGCTTGCATTATCTGGTGGTGCAGCAGTTTTACCAAGCAACAGAGCTGCAGTTTCAACTGGTGGAATTTATGAAACATCACAAACCGCTAATAGAAAATATTTGCATCGTGATGACCTAAAATCTTTTTTACCAGTCGGCTCTGTTATTATGGTAGCCTTTAATAGCGATAGTGGTAATATGCTGATTTGTAATGGTAGATTACTTGCAACCGCTGATTATCCTGAGTTGTTCCAAAGAATAGGATATACTTACGGTGGTTCTGGATCGCAATTTGCTCTTCCTGATACTCGAGGAGTATTTGTTAGGGGATACGATGCTGGGCGCGGATACGATGCTGGCAGGGTATTTGGTAGTTACCAAGCTGACGCGATGCAGCGTATTACTGCAAACTGGGCGATTGACGACCAAGTAGCAAGATCTACATATCCTCCATCTGGCGCATGTTATGCCGATAGTCCTGGTTCAGTTAACTTTGATTTAAAATCTGACGATAGAAAATGGCTTGGATACAAAATTCACTTTGATTCAGCAAGACAAACAAGAACTGCCGACCAAACGCGTCCACGCAATATTGCTTTTAACTATGCTATATGTGTTCGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
56edc9c9c70b0984af8659b2b1c9caff5cdaeff44c367a14a3d6482895f11206
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7482
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
CkP1, a S16-like broad-host-range myovirus, recognizes Citrobacter koseri lipopolysaccharide through its long tail fibres Oliveira,H., Santos,S., Pires,D., Pinto,G., Carrera,J., Briers,Y., Schmelcher,M., Dotsch,A. and Azeredo,J. 2022 — GenBank