Protein

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Genbank accession
XSF60894.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MRPGGVPVGEAVARAYEMLGFPRGTINVPINAGDLNYWDPNWQAPIGSASRGHDHFYVCNSNIRSYIGKKKEIPANVNHIYSSPTFPYLYTCRGSASNMGSQSVNTVYIQDWYNITPTKVIWYVLNLRYSNGNMVVSGNPFTGSDILISPSNFTIKGVSLPNSGYKFINQNAFGNLGYRSDMEYIGNNAAYTGVFGDTTARCEFIGSSNGGLWSPVNYGGAASQISLYKFGAGKQWYVDTNSNSIGNEHGPVWSPSTVPLRLFPGNVASTYVGDDINPSYPAAGNYYQPLATVWLGLPNAHSTIILTTEVIMGNINTAGMPVRTYGGSAWQVQGRRQQSYTAGDGIFHQILTLPPGYLVPYHSTTAYSYTQEWASRPDSMIFRRNGYIYTIKNLGNGNVELGVIIHAAEAAAIFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:426 AA
molecular weight: 46640,80880 Da
isoelectric point:8,99497
aromaticity:0,12676
hydropathy:-0,21808

Domains

Domains [InterPro]
IPR059609
RBD
3–426
IPR059609
XSF60894.1
1 426
Architecture
RBD
RBD 3-426
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XSF60894.1
1 426
Domain Start End Length (AA) Confidence
N-terminal 1 20 20 0,9467
Central domain 21 219 200 0,4959
C-terminal 220 426 206 0,9327
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-20
Central
21-219
C-terminal
220-426

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage PHZ191
[NCBI] 		3412729 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella pullorum
[NCBI] 		605 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSF60894.1 [NCBI]
Genbank nucleotide accession
PV394073 [NCBI]
CDS location
range 206 -> 1486
strand +
CDS
GTGAGACCTGGGGGTGTTCCGGTAGGGGAAGCGGTTGCCAGAGCATATGAAATGCTTGGATTTCCTAGAGGAACTATTAATGTACCTATAAATGCCGGAGATTTAAACTATTGGGATCCTAACTGGCAGGCACCTATTGGTTCTGCCAGTAGAGGTCATGATCATTTCTATGTATGTAACTCAAATATTCGCAGCTATATAGGTAAGAAAAAAGAAATACCGGCAAATGTAAATCATATCTATTCCTCCCCTACTTTTCCTTATCTATATACCTGTAGAGGTTCGGCTAGTAATATGGGTTCTCAGTCTGTTAACACTGTTTATATTCAGGACTGGTATAATATTACACCTACTAAGGTTATCTGGTATGTTTTAAACCTACGTTACTCTAATGGTAATATGGTGGTTTCTGGTAATCCATTTACTGGTTCTGATATCCTTATCTCTCCATCTAACTTTACTATTAAAGGGGTAAGTTTACCTAACTCTGGCTATAAATTTATTAATCAGAATGCCTTTGGTAATCTAGGTTATCGTTCAGATATGGAATATATAGGTAATAATGCTGCGTATACTGGGGTTTTTGGGGATACTACTGCGCGATGTGAATTCATTGGCTCTAGCAATGGTGGATTATGGTCTCCAGTTAACTATGGGGGTGCTGCCTCTCAGATTAGTTTATATAAGTTTGGTGCAGGTAAACAATGGTATGTAGATACTAATAGTAATTCCATAGGAAATGAACATGGTCCAGTTTGGAGTCCCTCTACAGTTCCACTACGATTATTCCCTGGTAACGTTGCTAGTACTTATGTTGGGGATGATATAAATCCATCTTACCCAGCGGCAGGCAACTATTATCAGCCTTTAGCTACTGTATGGTTGGGTCTGCCTAATGCTCATTCTACTATTATACTAACCACTGAAGTTATTATGGGTAATATTAATACTGCTGGAATGCCTGTGCGTACTTACGGAGGTAGTGCTTGGCAGGTACAAGGTAGACGGCAACAAAGTTATACTGCTGGTGATGGTATATTTCATCAAATACTAACATTGCCTCCAGGATATCTAGTACCATATCATAGTACTACAGCATATAGTTATACACAGGAATGGGCGAGCCGACCAGATAGTATGATTTTTAGAAGGAATGGTTATATTTATACTATTAAAAACCTTGGTAATGGCAACGTTGAGTTGGGTGTTATTATCCATGCTGCAGAAGCAGCTGCTATCTTCTTACCAAGACTACGTGTAACAGTTCAGCGCCTAACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
94291c32adb6b18792fb211a0d414cef67d51f84b71be36fa6e457e6bab66fc9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2903
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Characterization of broad-host-range bacteriophages targeting multidrug-resistant Salmonella spp. Wang,M., Ren,Y. and Jiang,L. 2021-06-10 — GenBank