Protein

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Genbank accession
AXC39382.1 [GenBank]
Protein name
flagellar hook-length control protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MDVSGTLTRAIDLSTTDISSKSLTTTEGATIGGDLVVAGTVDLSAADVSVKSLASAETITSAGVITVSDTVNSSTLPKLITTDATIGAVHAATIETTGSSTLKQVSATEVTATSIVLNSVGEGLRVDNNANINGILSVNNITSTNDTIAIAKSAAITGDLTVSGTVTPVQLT
Physico‐chemical
properties
protein length:172 AA
molecular weight: 17036,75890 Da
isoelectric point:4,19184
aromaticity:0,00000
hydropathy:0,36047

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AXC39382.1
1 172
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,2913
Central domain 11 161 152 0,6889
C-terminal 162 172 10 0,6859
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-161
C-terminal
162-172

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage CMSTMSU
[NCBI] 		2267248 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXC39382.1 [NCBI]
Genbank nucleotide accession
MH494197 [NCBI]
CDS location
range 339836 -> 340354
strand +
CDS
TTGGACGTATCTGGGACATTGACCCGTGCAATTGACCTAAGTACTACTGATATTAGTTCTAAGTCTCTAACCACAACTGAAGGTGCTACAATTGGTGGCGATCTTGTGGTAGCAGGTACTGTTGATCTAAGTGCTGCTGATGTGTCGGTGAAATCTCTTGCAAGTGCAGAGACAATTACAAGTGCTGGTGTTATTACAGTTTCGGATACAGTGAATTCTAGCACTCTACCAAAACTAATTACTACTGATGCAACTATTGGTGCTGTCCATGCAGCTACTATTGAAACAACTGGTTCAAGTACACTAAAACAAGTATCTGCTACTGAAGTAACAGCTACAAGTATTGTACTAAATTCAGTTGGTGAAGGTTTACGTGTTGACAATAATGCAAACATTAATGGTATATTAAGTGTTAATAATATTACTTCTACCAATGATACTATTGCAATTGCGAAAAGTGCTGCTATTACTGGTGATCTGACCGTATCTGGAACTGTTACCCCGGTGCAATTGACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2f9925015fb7b869b1375cf30f72d0888574ba423f1c94c1cade5eead6993042
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7406
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequence of Escherichia phage CMSTMSU Lelin,C., Thirumalaikumar,E., Abinaya,A., Paul,S., Rashmi,R., Arun,A., Sudhakar,S. and Citarasu,T. 2018-10-11 — GenBank