Protein

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Genbank accession
XTK87956.1 [GenBank]
Protein name
tail spike
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,63
TSP
Evidence RBPdetect2
Probability 0,89
Protein sequence
MSNIRTVGDFPRNEPGLVDKFLGTAYDHVRNVSDNMEELGRLDDVLAEIPTLAEQVTEETINAKMPEIQAEVDQRIDASMGEIDGKVAQAADSANAAASSVTAANSAVAAANSAKSGAEAAKSGADAAAALAAQEAINSKTVAYESTPFMPPYNAKGDGVTDDSAAFAAWEADATNRGKTVDMRGRTVLISTIPRLCAYTNGKFKLLTEQKTRVATTPFTFINQNGRYNAFGGQLNALRKALTNPFFQHVGIVLIGDSITWGSGTGENLPFDPRNGTLKDPRDSADTDSYVNIFKRYIGRNYMNDVAPVHTNFEHSTQGQSITTYQRDIILTPDAPDFTTTVSGSSLSTSRTYVNTLSESKWQYLYSSANSSPVPYHEIAWTMTGSEITISFAAVAGQCLSYELFVNDVSQGVFSTAPGSAIDSGVVVDMTNNNRRTHIFGFKRNAKIRVRTVRDATQGSTQVFRLNAIVIKKRVRISNQGINGATTYSYNTYNLNPATAPGFSGKPAVDSDDSFVTIQLGSNDRGITAVPGTPVAFESRIRAMIGYLPAGVKAILMCANPAVNSAGATMTMQDIRASLLKVAAELGNDFVDNYAAWGQADPLSLSADALHPNVQGFNIMACNLIRAMEDATDPFYVLPPAPIPWAHNLPVAGTNVTITRVGASLSETTVDATAAITGKQFRLNNGNTTPLGSYHRMTFRLTGTTRLRLYWSQTTASATFEVFVNGSSVGEVVTRDPVVAYNVFKDINLPANSATVPVDIELRTVRRDDQPTGTIVLYFESITVDQGSTITPVAPV
Physico‐chemical
properties
protein length:796 AA
molecular weight: 85416,57460 Da
isoelectric point:5,48095
aromaticity:0,07915
hydropathy:-0,18128

Domains

Domains [InterPro]
DC_2093
STR
8–157
DC_2093 SSF52266
G3DSA:3.30.750.60
ATT
150–225
G3DSA:3.30.750.60 DC_1326 DC_1326
IPR024429
ENZ
155–222
IPR024429 IPR036514
cd00229
ENZ
455–621
cd00229
IPR013830
ENZ
474–616
IPR013830
IPR013830
ENZ
474–625
IPR013830
XTK87956.1
1 796
Architecture
STR
ATT
STR
STR 8-149 | ATT 150-225 | STR 245-795 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XTK87956.1
1 796
Domain Start End Length (AA) Confidence
N-terminal 1 163 163 0,9699
Central domain 164 390 228 0,9079
C-terminal 391 796 405 0,5898
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-163
Central
164-390
C-terminal
391-796

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Holyagarpour
[NCBI] 		3418343 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XTK87956.1 [NCBI]
Genbank nucleotide accession
PV565043.1 [NCBI]
CDS location
range 66684 -> 69074
strand -
CDS
ATGAGCAATATCCGAACTGTGGGGGACTTCCCACGAAACGAGCCGGGCCTTGTGGACAAGTTCCTTGGCACGGCCTATGACCATGTTCGCAATGTTTCGGACAACATGGAGGAGTTGGGTCGCCTCGATGATGTGCTGGCCGAGATCCCTACGCTGGCTGAGCAAGTCACTGAAGAAACCATCAATGCCAAGATGCCTGAGATTCAGGCCGAGGTGGATCAACGCATTGATGCTTCGATGGGTGAAATTGACGGTAAGGTAGCTCAGGCTGCTGACTCCGCCAATGCCGCTGCGAGTTCGGTAACAGCTGCCAACAGTGCAGTAGCAGCAGCTAATAGTGCAAAGTCTGGAGCAGAAGCTGCCAAATCCGGTGCTGATGCTGCGGCTGCTCTGGCTGCTCAAGAAGCTATCAATTCCAAAACGGTAGCCTATGAGTCCACCCCTTTCATGCCACCGTATAACGCCAAAGGCGATGGTGTTACTGATGACAGTGCAGCCTTTGCTGCATGGGAAGCAGATGCCACCAACCGTGGTAAAACGGTGGACATGCGAGGTCGTACTGTTCTGATCTCGACCATTCCTCGTCTGTGTGCCTACACCAATGGCAAGTTTAAACTGCTGACTGAACAGAAAACTCGGGTGGCCACCACTCCGTTTACTTTCATCAACCAGAATGGTCGTTACAACGCTTTCGGTGGCCAGCTCAACGCCCTGCGTAAAGCTCTGACCAACCCTTTCTTCCAGCATGTGGGTATTGTGCTGATCGGTGACTCGATCACTTGGGGTTCCGGTACTGGTGAGAACCTGCCTTTCGATCCTCGAAACGGTACGCTGAAAGATCCTCGTGATTCGGCTGACACTGACAGCTACGTCAACATCTTTAAGCGCTATATCGGTCGGAACTACATGAACGATGTGGCTCCGGTACACACCAACTTTGAGCACTCGACTCAAGGTCAGAGCATCACGACCTACCAGCGTGACATCATCCTGACCCCAGATGCTCCTGATTTCACGACCACGGTCTCTGGTTCGTCGCTTTCGACCAGCCGTACCTACGTCAACACCCTGTCGGAATCGAAGTGGCAATACCTGTATTCCAGTGCCAACTCTTCTCCGGTTCCATACCACGAAATTGCCTGGACCATGACTGGCAGTGAAATCACCATCAGCTTTGCTGCTGTGGCTGGTCAGTGCCTGAGCTACGAGCTGTTTGTTAACGATGTATCGCAAGGTGTGTTCTCTACCGCTCCGGGTTCTGCAATTGACTCCGGTGTGGTTGTAGACATGACGAACAACAACCGTCGTACTCACATCTTTGGCTTCAAGCGTAATGCCAAGATCCGCGTCCGAACGGTACGTGATGCCACTCAAGGTAGCACTCAGGTATTCCGCCTCAATGCCATTGTGATCAAGAAGCGTGTCCGCATCTCGAACCAAGGGATCAACGGAGCGACTACCTACAGCTACAACACCTATAACCTGAACCCAGCAACGGCACCGGGTTTCAGTGGCAAACCTGCTGTAGACAGCGATGACAGCTTTGTCACCATTCAGCTTGGTTCCAACGACCGAGGCATCACCGCAGTACCGGGTACTCCAGTAGCCTTCGAATCCCGTATCCGGGCCATGATTGGTTACCTCCCAGCCGGTGTGAAGGCCATCCTGATGTGTGCCAACCCAGCCGTGAACTCTGCTGGGGCAACCATGACCATGCAGGATATCCGAGCTTCGTTGCTGAAAGTGGCAGCTGAACTGGGTAATGACTTTGTGGACAACTACGCAGCATGGGGTCAGGCCGATCCTCTGTCGTTGTCGGCAGATGCTCTGCACCCGAACGTCCAAGGCTTCAACATCATGGCGTGCAATCTGATTCGTGCCATGGAAGACGCCACCGATCCGTTCTATGTGCTGCCGCCTGCTCCGATTCCATGGGCACATAACCTGCCAGTGGCAGGCACCAACGTAACCATTACTCGTGTAGGTGCATCGCTGTCGGAAACCACAGTTGATGCCACTGCTGCCATTACTGGTAAGCAGTTCCGTCTGAACAACGGCAACACTACTCCGCTTGGTTCCTACCACCGGATGACGTTCCGATTGACTGGTACTACCCGTCTGCGGCTGTACTGGTCTCAAACCACGGCTTCGGCAACCTTCGAAGTCTTCGTCAATGGTTCTTCTGTTGGCGAAGTGGTTACCCGAGATCCAGTGGTTGCTTACAACGTGTTCAAGGACATCAACCTGCCAGCCAACAGTGCAACTGTTCCAGTAGACATCGAGCTGCGTACTGTTCGCCGTGATGATCAACCTACTGGTACGATTGTCTTGTACTTCGAGTCCATTACTGTGGATCAGGGATCGACTATTACCCCAGTGGCTCCGGTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
a610f1bba05c7037d2ab5839100d2f729af9f6febec7288bd7551c5653472668
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7203
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50