Protein

View in Explore
Genbank accession
QXV74095.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MALAAQKIIVRIGMSEETPGMDPGEMGWDMDLARLRVGDGSPNPTYVMTNKSKGPFEYNFIQYAQYPEIRMLPEGTVDGVDISDLNRENGLVTRIGDNLWAHRTITNTDGYVKISFGDGVAQNPVINFSDEFKVDISEFLKFVAVDDITIHGNGTLAAPLYAQIATFTLRGVIRIATLAEVNAGVDTTTAVCPAYLKNYVTNNSKKFGAILKTGLIYAFPNLQDSGNLPSLAGYTCAVVTVSGGGDIIDGGGIRLRIGNVTFAPPSQFLGDNPAVSSFSAGSGGSFSGASQFAMFKSGGVWYATSNGVAYVVGSGDNFTWGKDDGTGGALFAGTPVGF
Physico‐chemical
properties
protein length:338 AA
molecular weight: 35672,72720 Da
isoelectric point:4,74523
aromaticity:0,10355
hydropathy:0,02663

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QXV74095.1
1 338
Domain Start End Length (AA) Confidence
N-terminal 1 127 127 0,8139
Central domain 128 326 200 0,1536
C-terminal 327 338 11 0,9636
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-127
Central
128-326
C-terminal
327-338

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHEph12
[NCBI] 		2836128 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QXV74095.1 [NCBI]
Genbank nucleotide accession
MW980064 [NCBI]
CDS location
range 56366 -> 57382
strand -
CDS
ATGGCACTAGCGGCACAAAAGATCATCGTTCGGATTGGTATGTCGGAAGAAACTCCCGGCATGGACCCCGGCGAAATGGGTTGGGATATGGACCTTGCACGCTTGCGCGTTGGCGATGGTTCTCCCAATCCTACCTACGTCATGACGAACAAGTCGAAAGGCCCGTTCGAATACAACTTCATCCAGTATGCGCAGTATCCGGAAATCCGGATGCTACCAGAAGGTACGGTCGATGGCGTCGATATCTCCGATCTCAACCGCGAGAACGGTCTGGTAACACGCATCGGCGATAACCTGTGGGCGCATCGCACTATTACCAACACCGATGGTTACGTGAAGATTTCGTTCGGTGATGGCGTGGCGCAAAACCCGGTCATCAACTTCTCGGATGAATTCAAGGTCGATATCTCCGAATTCCTCAAGTTCGTTGCGGTTGACGATATTACCATTCACGGTAACGGCACGCTGGCTGCGCCGCTGTACGCGCAGATCGCAACGTTCACGCTGCGCGGTGTTATCCGTATCGCTACGCTGGCCGAAGTCAACGCGGGCGTCGATACTACCACGGCGGTTTGCCCTGCGTATCTCAAGAACTATGTTACCAACAACTCGAAGAAGTTCGGCGCGATCCTCAAGACCGGCCTCATTTATGCCTTCCCCAATCTGCAAGACAGCGGCAACCTACCATCTCTGGCAGGATACACGTGCGCCGTTGTTACCGTAAGCGGCGGCGGTGATATCATTGATGGTGGCGGCATTCGCTTGCGCATTGGTAACGTCACTTTTGCGCCGCCGTCTCAATTCCTTGGGGATAACCCTGCCGTATCTTCGTTCTCCGCTGGTTCTGGCGGATCGTTCTCAGGGGCTTCGCAATTCGCCATGTTCAAATCTGGCGGTGTTTGGTATGCCACATCTAACGGCGTGGCGTATGTTGTCGGCTCGGGCGATAACTTCACGTGGGGTAAGGATGACGGAACCGGCGGTGCGCTTTTTGCCGGAACGCCGGTTGGTTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
833cd6fb5e213b5664b068eec6e79abf6386d34bea3130b3bd2a42f561152144
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4677
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Hidden Diversity of Double-Stranded DNA Phages in the Symbiotic Bacterium Rhizobium Santamaria,R.I., Bustos,P., Cauwenberghe,J.V. and Gonzalez,V. 2011 — GenBank