Protein

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Genbank accession
YP_012792006.1 [GenBank]
Protein name
tail fiber-like protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MPTSNKIVTVSGTGYTVDVTVCNLDADLTLKDFVVLHNGVLVSNTNYTKTTRTILTYTGTALPSTTVEVRRRTPTNYILGARYGSRIRSDDWNKELDRITRRAEEYELNGVGAGSITGSQAPQNDPFGASWASDIVYPPTRQAVYSWGVNLVNATQLSSTLSSYVTNTALSTLLTNYALSASPSFTGNPTVPTQLTTDSSTRIANTAFVQNLISGLNLPTTYAPLASPTFTGTPSAPTPAAGNSSTRLATTAFVSQSQRPFVDATRNTTPQALAHNTYTTLVWNNEISDADNVYNSTTGAFTVPAGLGGYYEFTGAVLLSAGCNNLIVEIYVNGVSARRIGQSQAGSDVLFGLPFTGSVLLGAGDVVTLRFYLFNGSSASRDMLVTSGAFNWVTMKRLNV
Physico‐chemical
properties
protein length:400 AA
molecular weight: 42614,00270 Da
isoelectric point:7,70642
aromaticity:0,09000
hydropathy:-0,06625

Domains

Domains [InterPro]
DC_0465
STR
1–219
DC_0465 DC_2167
Coil
Unmapped
89–109
Coil IPR008983
IPR008983
RBD
270–386
IPR008983
YP_012792006.1
1 400
Architecture
STR
RBD
STR 1-219 | RBD 220-399 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Leptolyngbya phage LPP-2, strain SPI
[NCBI] 		2996053 Uroviricota > Caudoviricetes > Saffermanviridae > Wumptrevirus LPP2 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012792006.1 [NCBI]
Genbank nucleotide accession
NC_111529.1 [NCBI]
CDS location
range 15593 -> 16795
strand -
CDS
ATGCCAACGAGTAACAAGATAGTTACCGTCAGTGGTACAGGTTACACAGTAGATGTGACAGTGTGTAACCTAGACGCTGACTTAACACTAAAAGACTTTGTAGTACTTCATAACGGAGTACTCGTAAGTAACACTAACTATACTAAGACGACTAGAACCATCTTGACCTATACGGGTACAGCGTTACCTTCTACGACTGTAGAGGTTAGACGAAGAACACCGACCAACTATATCCTTGGTGCAAGGTATGGTAGTCGTATCCGTAGTGATGACTGGAACAAAGAACTAGACCGTATCACTAGACGTGCTGAAGAGTACGAGCTTAACGGTGTAGGGGCTGGTAGTATCACTGGTAGTCAAGCACCACAGAACGACCCCTTTGGTGCATCATGGGCTAGTGATATCGTTTACCCTCCGACAAGACAAGCTGTGTACAGTTGGGGTGTAAACCTCGTTAACGCCACACAGTTATCTTCTACGTTGTCGTCATACGTGACAAACACAGCACTGTCTACGCTGTTAACTAACTATGCGTTATCTGCTTCACCTTCCTTTACGGGGAACCCAACAGTACCTACACAGTTAACGACAGACAGTAGTACACGTATCGCTAACACAGCGTTTGTTCAGAACCTTATCTCAGGGTTAAACTTACCGACAACGTACGCACCTTTAGCTAGTCCTACGTTCACAGGTACACCATCTGCACCTACACCCGCTGCTGGTAACTCTTCAACTAGGTTAGCTACTACAGCTTTTGTGTCTCAAAGCCAAAGACCGTTTGTAGATGCTACACGTAACACGACACCACAGGCTCTTGCTCACAACACATACACTACGCTTGTATGGAACAACGAGATCAGTGATGCTGATAACGTATACAACTCGACCACAGGTGCGTTTACTGTACCCGCTGGTTTAGGTGGCTACTATGAGTTCACTGGTGCTGTGTTGTTAAGTGCTGGCTGTAACAACCTTATCGTAGAGATCTATGTAAACGGTGTATCAGCTAGACGTATCGGACAAAGCCAAGCAGGTAGTGATGTCTTGTTTGGTCTACCCTTCACTGGAAGTGTGCTGCTCGGTGCTGGTGATGTCGTGACACTGAGGTTCTACCTGTTTAACGGTTCATCAGCATCTCGTGATATGTTGGTCACTAGCGGTGCGTTTAACTGGGTCACTATGAAACGCCTGAACGTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
23dfd11c04cb34d06ff11041386ab01401fdb59a73ffbf86c4e837efee12d299
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8106
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Sequencing the genomes of LPP-1, the first isolated cyanophage, and its relative LPP-2 reveal different integration mechanisms in closely related phages Shaalan,H., Cattan-Tsaushu,E., Li,K. and Avrani,S. 2023 — GenBank