Protein
View in Explore- Genbank accession
- CAL1328824.1 [GenBank]
- Protein name
- Tail connector protein
- RBP type
-
TSPTSPTF
- Protein sequence
-
MADLKVGSTTGGSVIWHQGNFPLNPAGDDVLYKSFKIYSEYNKPQAADNDFVSKANGGTYAATVRFNGGVHVPTIGSSQQCGVYPGNGDAATFAMANIDIVSWNGIGFKSSQGSADRTVVINARTGDISTKGGFYATGPVRSNATAPIAANDLTRKDYVDGAINTVTANANSRVLRSGDTMTGNLTAPNFFSQNPASQPSHVPRFDQIVIKDSVQDFGYY
- Physico‐chemical
properties -
protein length: 220 AA molecular weight: 23233,33270 Da isoelectric point: 6,81610 aromaticity: 0,10000 hydropathy: -0,31682
Domains
Domains [InterPro]
DC_0466
STR
1–218
STR
1–218
IPR005601
STR
56–194
STR
56–194
1
220
Architecture
STR 1-218 |
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
220
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 48 | 48 | 0,8010 |
| Central domain | 49 | 209 | 162 | 0,0754 |
| C-terminal | 210 | 220 | 10 | 0,9571 |
Note: Constraints were applied during segmentation.
C-terminal too short, adjusted boundary
C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-48
1-48
Central
49-209
49-209
C-terminal
210-220
210-220
Taxonomy
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAL1328824.1
[NCBI]
Genbank nucleotide accession
OZ034685
[NCBI]
CDS location
range 152965 -> 153627
strand +
strand +
CDS
ATGGCTGATTTAAAAGTAGGTTCAACAACTGGAGGCTCTGTCATTTGGCATCAAGGAAATTTTCCATTGAATCCAGCCGGTGACGATGTACTCTATAAATCATTTAAAATATATTCAGAATATAATAAACCGCAAGCTGCTGATAACGATTTCGTTTCTAAAGCTAATGGTGGTACTTACGCCGCGACTGTTCGATTTAATGGAGGCGTACATGTTCCTACTATAGGTAGTAGTCAACAGTGCGGTGTTTATCCAGGTAACGGTGATGCAGCTACTTTTGCTATGGCAAATATTGACATCGTTTCGTGGAATGGTATTGGTTTTAAATCATCACAAGGTTCAGCAGACCGAACTGTTGTTATTAACGCTCGTACCGGTGATATCAGCACTAAGGGCGGTTTTTATGCAACTGGTCCTGTCCGTTCTAACGCTACTGCTCCTATAGCAGCGAATGACCTTACTAGAAAGGACTATGTTGATGGAGCAATAAATACTGTTACAGCAAATGCGAACTCTAGAGTGTTGCGTTCTGGTGACACTATGACGGGTAACTTAACCGCACCAAACTTTTTTTCGCAGAATCCCGCATCTCAACCTTCACATGTTCCACGATTTGACCAAATCGTAATTAAGGATTCTGTTCAAGATTTCGGCTATTATTAA
Genome Context
Genome Context
Tertiary structure
PDB ID
62342125ef6479e2a02c8298aea6b6d316211d53df64354f394bb19db7440ec9
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50