Protein
View in Explore- Genbank accession
- WGH49683.1 [GenBank]
- Protein name
- hypothetical protein
- RBP type
-
TSPTF
- Protein sequence
-
MSSLHFKTPNVSSFTLDGNMFNMNNNGTGIGWVELRVFIRPSGSFNANQNLWRTNSSQNRCLHSSSQRISFSTPEISELLTPAGSAPFNTWLVVRVEVDYVNTKTKLSVLREDTNEFHSVDTAGIATTFFNLASASIFDFYLDYFAASSGVIYRASNSNGTGNLLIADTGQSVVLGGNWPTNNQQWILTEPEPTIVKVGLGWPALERDFDSIPDFISARASSRFFMVVSCLGDLGSSPNLIQTSEFFGGLLFTSPVKYIGNNHNDLPFFDGSLYFTSIAPVTFEHLALYNSIANTYAIRLIRASSFLQNCYIKKLTTSGGSGVLVDLGLASAKNLVIDANNLIATTIRSTTSPVQNVVGFNATNRGMQIAGEGNTGTHKNLFSLNSGISDYFWSGTASLIPSNLTNSASEKSGDYAGQYTGYTTAEFVDFANGDYRIKASSPLHALGIGSFFEEVGTPTGSYYYSDVSNIQLNSVTSIDYVIDPANDPTSPNYVLFLNGVDEYVQLNSPINITAPEFEIEFIGNGRGYDESVAYIFGNLGDANNRLWIGGVDYNELSLSNATGQTINFTNMNFFVADENRLVISRDINNIVSVTINDEPHNQTFVLSGNITPTILGNSGGALPAGIARADEIEIDKLKVTVGGVVINHYEPTVTEGVGIILKDTESDNDGTIINFKSNLHHWKYYDGIVIDEQTEARIGNGWASKVYVSSPTLGGFLSTFKSLTFTDEITCYAVGDCSYSVFFDQTGATLNFTNADFEQGLYVKGMIPFNGKNYDRVARLNNQITSNSQLFIDDFYIYSEQAGASAVVSDDNTRLMRCYVEHTGGASALGIVQMKDYSTLRNCIVRSLTPSPLGINTSEPSFIGNTVAIGCDVNMKISSPSPKSYEYLFATQSTTSDFDITNSFVFRYASGDNTGQYTGYTTAEFVDFANKDYRIKYSSDLHPLNIGAFFQEFVEGGISYFYGDSSVLTLNSEQSFYSKIANSYVSTFSIVGNGNGNHITVPNNQVPTISIDFNNELYASTHQGGTSEVGVDFIPNTSAVSQIIESSNVQVDDVQSLMVEISNSNLSNIDILFYANVSAYNNINNISELVIDDISNTNAVMTNNSLSNMHISNIDNTYIATNIFDYGDININNIDRHSVFSNISKISEFNFETVSKFNFRMNFFQDITMDIQTIDAHSGYANFNDVSQINIVSIDNVEINVGFSGVSVFDVSVLPNTYVSATVDNKSTFDISDVESFIVKFEIQDKSVFDIADISNAYISMTVDKSSSFDVSNIEAVLAKFEVQDKSTFDVSDIASVLSEFQIQDRSTFDITGLSSNLIEHNIVDASTLFVDGVSAITLHASNHDKSTFNIWIDGDVFNSVSISDVYSISNFNLIMGEEYHIENNTNVVSSFNVHGIVNFHTEVNHADMSGISIITGDSYNINVTNNNVVDINVENITNTHMEMNQHEESLIEVDDLTASNVEFNENTTSLINIDDVQSQYVVIRTSPVSELTVDLVPTYSVEFNAYTNSGFNLSYTGNPFIAAIIMDRSIIDLTIIDEIEYIIASPEFKYFDKSTLRIDGVDASTIFFNTSTVANNLVDFVPEFNTVTTIANGSMIDLVMSGNPILAIEYVSTSELTIDMVQSSEFVSLISNGSALDITTIQGQNFIVAVKDVSYNDLTIVESTNVAVAENTINTLNVSFSNQIQYASLYSDVSKFDVAFISEFFIVIDFDVYEYSERSISYIDVVPNYFVSHAEHSDSVFDIGTERGYNIEITDDTVGDIVVSIKTELDVRLFNNITIYIKPTDIGTPVIDTGKSWLDDSVFRTDMKTRTIVTGKSMLDDLVISTAINRTTTIPLELSTRA
- Physico‐chemical
properties -
protein length: 1843 AA molecular weight: 202423,75020 Da isoelectric point: 4,28091 aromaticity: 0,10852 hydropathy: -0,03842
Domains
Domains [InterPro]
No domain annotations available.
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
1843
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 234 | 234 | 0,2069 |
| Central domain | 235 | 464 | 231 | 0,8021 |
| C-terminal | 465 | 1843 | 1378 | 0,0926 |
Note: Constraints were applied during segmentation.
Fixed 141 C-terminal predictions appearing before Central domain|Sequence started with non-N-terminal domain
Fixed 141 C-terminal predictions appearing before Central domain|Sequence started with non-N-terminal domain
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-234
1-234
Central
235-464
235-464
C-terminal
465-1843
465-1843
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
Alishewanella phage vB_AspM_Slicko01 [NCBI] |
3038238 | Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes |
| Host |
Alishewanella sp. SMS8 [NCBI] |
2994676 | Pseudomonadota > Gammaproteobacteria > Alteromonadales > Alteromonadaceae > Alishewanella > |
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
WGH49683.1
[NCBI]
Genbank nucleotide accession
OQ508956
[NCBI]
CDS location
range 103569 -> 109100
strand -
strand -
CDS
ATGTCTTCATTACATTTCAAGACTCCTAATGTAAGTTCGTTTACATTAGACGGTAATATGTTTAATATGAACAATAACGGTACTGGTATTGGGTGGGTAGAACTTAGAGTATTTATTCGCCCTTCTGGTTCTTTTAATGCCAATCAGAATTTGTGGAGAACAAATTCTTCACAGAACAGGTGCTTGCATAGTTCATCTCAGCGTATTTCATTCTCTACTCCTGAAATATCTGAATTACTAACTCCAGCAGGTTCTGCACCCTTCAATACATGGCTTGTAGTGCGTGTAGAGGTAGACTATGTTAATACTAAAACAAAATTATCGGTACTTAGAGAAGATACTAACGAGTTCCATTCAGTAGATACAGCAGGCATTGCGACAACGTTTTTTAATTTAGCTAGTGCTAGTATTTTTGATTTTTATCTAGACTATTTTGCTGCAAGTTCTGGTGTAATTTATAGAGCTAGTAACAGTAACGGTACTGGAAACCTACTTATAGCGGATACAGGTCAGTCAGTTGTGTTGGGTGGGAACTGGCCAACTAACAACCAACAATGGATATTGACAGAACCAGAACCTACTATTGTAAAGGTAGGTTTAGGTTGGCCTGCGTTAGAACGTGATTTTGATAGTATTCCTGATTTTATTTCTGCACGAGCATCTTCTAGATTTTTCATGGTCGTATCGTGTCTTGGAGATTTAGGTTCTTCACCAAATTTAATACAAACCTCAGAATTTTTTGGCGGGCTATTATTTACAAGTCCAGTAAAATATATAGGCAACAATCATAACGATTTACCGTTTTTTGATGGGTCTCTTTATTTTACATCAATCGCACCTGTAACCTTTGAGCATCTAGCATTATACAATAGTATAGCAAATACTTACGCCATCAGACTAATACGCGCTAGCTCGTTTTTACAAAACTGCTATATTAAGAAATTAACAACATCTGGAGGCTCAGGAGTATTGGTAGATCTTGGTTTAGCTTCGGCTAAAAATTTAGTCATTGATGCGAATAACTTAATAGCGACTACGATAAGAAGCACAACCTCACCTGTTCAAAATGTAGTTGGTTTTAATGCGACTAACCGAGGGATGCAGATAGCAGGCGAAGGCAACACTGGAACTCATAAAAATCTATTTTCTCTTAATAGCGGAATTAGTGATTATTTTTGGAGTGGAACCGCTTCTTTAATCCCATCCAATTTAACTAATAGTGCCAGTGAAAAGTCTGGAGACTACGCTGGTCAATATACTGGCTACACTACTGCTGAGTTTGTAGATTTTGCTAATGGTGATTACCGCATTAAGGCAAGTTCACCATTACATGCTTTAGGTATTGGTTCATTCTTTGAAGAAGTAGGGACACCAACAGGTTCATACTATTATTCTGATGTTTCTAATATACAACTTAACTCAGTTACATCAATTGATTATGTTATAGATCCCGCCAACGATCCAACATCACCTAATTATGTATTATTTTTAAATGGTGTTGATGAGTATGTACAACTAAATTCACCAATCAATATAACAGCGCCAGAATTTGAAATTGAGTTTATAGGTAATGGTCGCGGTTATGACGAGTCTGTTGCTTATATTTTTGGTAATCTTGGTGATGCTAATAATAGATTATGGATCGGTGGTGTAGACTATAACGAACTATCATTATCAAACGCAACTGGCCAGACGATAAATTTCACCAATATGAATTTCTTTGTAGCTGATGAAAATCGGTTAGTAATAAGCAGAGATATTAATAACATTGTTAGCGTCACTATTAACGATGAACCACACAATCAAACATTTGTTCTAAGTGGTAACATCACTCCAACTATTTTAGGTAATTCTGGTGGCGCTTTGCCAGCTGGTATAGCAAGGGCAGATGAGATAGAGATTGATAAGTTAAAGGTTACCGTCGGTGGTGTGGTTATTAATCATTATGAGCCTACTGTTACTGAGGGTGTAGGTATCATTCTAAAAGACACCGAAAGTGACAATGATGGCACCATAATCAATTTCAAATCTAATTTACATCATTGGAAGTATTATGATGGTATTGTTATAGATGAGCAAACTGAGGCTAGGATTGGTAATGGTTGGGCATCTAAGGTTTACGTATCATCCCCAACTCTAGGTGGATTTTTATCCACTTTTAAATCATTAACCTTTACTGACGAGATAACATGTTACGCAGTTGGTGATTGTTCTTATAGCGTATTTTTCGATCAGACTGGAGCAACATTAAACTTTACTAATGCTGACTTTGAGCAAGGACTCTATGTTAAAGGGATGATACCGTTTAATGGTAAAAACTATGATAGGGTAGCGAGACTAAACAACCAAATCACATCAAATTCTCAATTATTCATTGATGATTTTTATATCTACTCTGAACAAGCAGGCGCATCAGCAGTCGTAAGTGATGACAATACACGATTGATGCGGTGTTATGTAGAGCATACTGGTGGAGCAAGTGCGTTAGGTATTGTTCAGATGAAGGATTATTCTACCTTAAGAAATTGTATAGTTAGATCATTAACACCATCACCTTTAGGGATAAATACATCCGAACCATCATTTATAGGAAACACAGTGGCGATTGGTTGTGATGTTAACATGAAGATCTCATCACCATCACCTAAATCATACGAGTATTTATTTGCAACTCAGTCAACTACATCTGACTTCGATATAACAAACTCATTTGTATTCAGATATGCGTCTGGTGATAATACTGGTCAATATACTGGCTACACTACTGCTGAGTTTGTAGATTTTGCTAACAAAGATTATAGGATAAAATACTCATCAGACTTGCATCCATTAAACATTGGTGCATTCTTTCAAGAATTTGTTGAAGGTGGTATATCTTATTTCTACGGTGACTCTTCGGTACTGACTCTGAACTCTGAACAGTCTTTCTACTCAAAGATAGCAAACTCTTATGTTAGCACTTTCTCGATAGTCGGTAATGGTAATGGTAATCACATAACAGTACCAAACAACCAAGTACCAACAATCTCTATCGATTTTAATAATGAACTTTACGCAAGCACTCATCAAGGCGGTACATCAGAGGTTGGTGTTGATTTTATACCAAACACATCAGCAGTCTCTCAGATTATAGAATCATCAAATGTTCAGGTAGATGATGTTCAATCTTTGATGGTTGAAATATCAAACAGTAATTTATCTAACATTGACATTTTATTTTATGCGAATGTATCAGCATATAACAACATAAACAACATATCAGAGTTAGTAATAGATGATATATCCAATACTAATGCGGTAATGACTAATAATAGTCTATCCAATATGCATATATCTAACATAGATAATACGTATATAGCAACTAATATATTTGATTATGGTGATATAAACATTAACAACATCGATCGTCACTCAGTCTTTAGTAATATTTCTAAGATAAGTGAGTTCAATTTTGAGACAGTGAGTAAGTTTAATTTCAGAATGAACTTCTTCCAAGACATTACCATGGACATTCAGACCATTGATGCTCACTCTGGCTATGCAAACTTTAATGATGTCTCACAGATAAACATTGTTAGTATAGACAATGTAGAAATCAATGTTGGATTTTCTGGTGTGTCTGTGTTTGATGTGAGTGTATTACCTAATACTTACGTGAGTGCCACGGTAGATAACAAATCAACATTTGACATTAGTGATGTTGAGTCATTCATAGTAAAATTCGAAATACAAGATAAATCGGTATTTGACATAGCAGATATTTCCAATGCATACATCAGTATGACCGTGGATAAGAGTTCTTCGTTTGATGTATCTAACATTGAAGCTGTACTTGCTAAATTTGAAGTGCAGGATAAGTCAACCTTTGATGTATCAGATATTGCGTCTGTCTTGTCCGAGTTCCAAATACAAGACAGATCAACATTCGACATTACTGGTCTATCTTCTAATCTGATAGAACATAATATCGTTGATGCGTCTACCCTGTTTGTTGATGGTGTTAGCGCTATAACACTACATGCGTCAAACCATGATAAGTCTACATTCAACATCTGGATTGATGGAGATGTGTTTAACTCAGTATCTATTTCTGACGTATATAGTATCTCTAATTTCAACCTGATAATGGGCGAAGAGTACCACATTGAGAATAACACTAATGTTGTTAGCTCATTCAATGTGCATGGTATTGTAAACTTCCATACCGAAGTCAACCATGCTGATATGTCTGGTATCTCTATCATTACTGGTGACAGTTACAATATTAATGTGACCAATAATAACGTGGTCGATATCAATGTAGAAAACATCACGAACACTCATATGGAGATGAACCAGCATGAAGAATCATTGATTGAGGTTGATGATCTGACTGCGAGTAATGTAGAGTTTAATGAGAATACAACCTCATTGATTAACATTGATGATGTACAGAGTCAGTACGTGGTAATCAGAACCTCACCAGTATCGGAACTTACTGTAGACCTTGTACCAACATATTCTGTTGAATTCAATGCGTATACTAATAGTGGTTTTAATCTTAGTTATACTGGTAACCCATTTATAGCCGCGATTATCATGGATAGAAGCATTATAGATCTAACCATCATAGATGAGATTGAGTATATAATTGCCAGCCCAGAGTTTAAATATTTCGATAAGTCAACTTTGCGTATTGATGGCGTGGACGCATCAACCATATTCTTTAACACATCAACCGTAGCAAATAATTTGGTAGATTTTGTTCCAGAGTTTAATACAGTTACCACCATCGCAAATGGATCGATGATTGATCTGGTTATGTCTGGTAATCCTATATTAGCCATTGAGTACGTTAGTACATCAGAGCTGACCATTGATATGGTTCAGAGTAGTGAGTTTGTTAGTCTTATTAGTAACGGTAGTGCTTTAGACATAACCACGATACAAGGACAAAATTTCATTGTGGCTGTAAAAGATGTCTCATACAATGATCTTACAATCGTTGAAAGTACAAATGTCGCTGTTGCTGAAAACACAATTAACACACTGAATGTATCGTTCTCTAATCAGATCCAATACGCATCACTGTATAGTGACGTGAGTAAATTCGATGTTGCTTTCATAAGCGAGTTTTTTATTGTAATCGACTTTGATGTGTATGAGTACTCTGAGCGTTCTATTTCGTATATTGATGTTGTTCCAAACTACTTCGTTTCACATGCAGAACATAGTGATTCTGTTTTTGATATTGGCACAGAGCGCGGATATAACATTGAGATCACGGATGACACAGTTGGTGATATTGTTGTTTCAATAAAAACAGAGTTAGATGTCAGACTGTTCAATAATATTACTATCTATATTAAGCCTACTGATATCGGTACACCTGTTATTGATACTGGTAAATCTTGGTTGGATGACAGTGTATTCAGAACTGACATGAAAACGAGAACCATCGTAACTGGTAAATCGATGTTGGATGATTTAGTAATATCCACTGCTATAAATAGAACTACAACGATTCCTTTAGAATTAAGTACGAGGGCATAA
Genome Context
Genome Context
Tertiary structure
PDB ID
cf0509bdce1ab76340b350bac5db22f2cb3973d475affab511e586d2b3e28761
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50
Literature
| Title | Authors | Date | PMID | Source |
|---|---|---|---|---|
| Ecogenomics reveals distinctive viral-bacterial communities in the surface microlayer of a natural surface slick | Rahlff,J., Wietz,M., Giebel,H.-A., Bayfield,O., Nilsson,E., Bergstrom,K., Kieft,K., Anantharaman,K., Ribas-Ribas,M., Schweitzer,H.D., Wurl,O., Hoetzinger,M., Antson,A. and Holmfeldt,K. | 2023 | — | GenBank |