Protein

View in Explore
Genbank accession
XYA29482.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSKPRTPVEMPDNLISKDKIKLLLAVSDGEVVNDFSMKQLHFGGVPVQNEDGTFNYEGVIAEFRPGTQTQDYIQGFSESSAEFQVAREVTHNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTGKIDGKNTTGGYDRSIRVNLPQNFTSQVLIRVSRVTPDADGVKVVDAFRVESYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIIQVPSNYDPINRTYSGTWDGVFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDVVVQSQVEAFQLVRDICSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNPDAAMRFGHNPTSITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRIMEVTGTQVFLAFRCDAKAGDTLILNTDDGKPVRRTIASVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYDPNKYDAIDNGVITDGRPTSVVDPDSMGAPKDLTISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNVASPWSALATATLTGKVGAPKGPINLFASDNEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPAAEYWHSILPAGYVNFYKARSVDRIGNVSEWTDYARGMSSTDVNIITDAILDEILDSDAMKELQESAQDSAAKLNDYANSIIQNALANDADVRRMTKENGKRKAEIAHTTVLIANESEARAAEITELKTQIDEDITSQITILNEALADESETRATQINQLQTQFGEDMAAGFTQVNQAIANESEARANSEAALDAKIGQNSAALDQKLDSWANVNGVGSMYTMKLGLKYNGKEYNSGMALQLTAQGNNVVSQVLFIADRFAIIRNAESGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGQYIQSNNFISGRQGWMINKNGGSEFNNVVVRGEMYAASGKFGFDGGNGVVINGNGITVNLDGGGRIVLGRF
Physico‐chemical
properties
protein length:1150 AA
molecular weight: 126955,70420 Da
isoelectric point:4,72044
aromaticity:0,09304
hydropathy:-0,29157

Domains

Domains [InterPro]
DC_0014
STR
1–1150
DC_0014
IPR053171
Unmapped
3–871
IPR053171 IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783 Coil
IPR036116
STR
629–716
IPR036116
XYA29482.1
1 1150
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1150
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYA29482.1
1 1150
Domain Start End Length (AA) Confidence
N-terminal 1 500 500 0,8769
Central domain 501 1080 581 0,0596
C-terminal 1081 1150 69 0,5460
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-500
Central
501-1080
C-terminal
1081-1150

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage vB_KpnS-Tlon
[NCBI] 		3447925 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYA29482.1 [NCBI]
Genbank nucleotide accession
PV891804.1 [NCBI]
CDS location
range 2933 -> 6385
strand -
CDS
ATGACTAATATCAAGGCCCGCAAGGGCGGTTCAAGCAAGCCACGTACTCCCGTAGAAATGCCAGATAACCTGATCTCAAAAGATAAGATCAAGTTGTTGCTTGCTGTTTCAGATGGCGAGGTGGTTAACGACTTCAGCATGAAGCAGTTGCATTTTGGCGGCGTCCCGGTTCAGAACGAGGATGGAACATTCAACTATGAGGGCGTGATTGCAGAGTTCCGACCCGGCACGCAAACGCAGGACTACATTCAGGGCTTCAGCGAGTCAAGTGCTGAATTCCAGGTTGCTCGTGAAGTCACTCACAACACGCCTTATACGCTTACCGTATCGAACAAAAATCTTTCTGCTATTCGCTTTCGCCTGTTATGGCCGCGCGTGCTGACTCAAAAAGATAACGGCGATATGGTAGGATCGGTTGTTGAGTACAAGATCGAGATGGCGGTAGATGGTGCAAGTTATCAGACCTACCTAACTGGCAAGATTGACGGTAAGAACACGACTGGCGGTTACGATCGGAGCATTCGCGTTAACCTGCCGCAAAACTTCACGTCGCAGGTGCTTATCCGCGTTAGTCGAGTAACGCCGGACGCTGACGGGGTGAAAGTTGTCGACGCTTTCCGGGTTGAATCCTACGCTGAAGTTATTGATGCAAAATTCCGCTACCCGTTAACGGCCATGCTTTACGTTGAGTTCGATAGCGATCTGTTCCAGAACCAGATCCCCACTATCTCACTCAAAAAGAAATGGAAGATTATCCAGGTTCCGAGCAACTACGATCCGATTAATCGCACGTACTCCGGAACGTGGGACGGTGTTTTCAAGTGGGCGTGGAGCAATAACCCGGCCTGGGTTCTTTATGATCTGATCATGAATCAGCGCTATGGTTTAGACCAGCGTGAGTTAGGAATCCCGGTTGATAAGTGGTCGCTGTATGAGGTGGCGCAATATTGTGATGAACTTGTTCCGGACAATCGCGGCGGGATGGAACCGCGCTATTTGATGGATGTGGTTGTTCAGTCGCAGGTTGAGGCGTTCCAGTTGGTAAGGGATATTTGTTCCGCGTTCCGTGGAATGACGTTCTACAACGGTGAAAGCCTATCGATTATCGTCGATAAGCCGCGCGATCCGGTGTACCTGTTTACTGCTGATAACGTCGTTGATGGCGTTTTCGTTCGGACGTTCCCAAGCGAAAAGACGATGTATACGTCGTGCAACGTCATGTTCGACGACGAAGAAAACCAGTACGAACAGGATGTTGAACCAGTGTTCAACCCGGACGCAGCCATGCGATTTGGCCACAACCCGACCAGCATTACAGCGATCGGATGCACCAGAAGGACGGAGGCGAACCGCCGTGGGCGTTGGATTCTGCAAACGAACCTAAGCGCCACAACCGTTTCGTTTTCTACTGGCCTGGAAGGTATGATTCCTTCTTGCGGCGATGTGATTTACGTTGCAGATCCGCATTGGCAATCGGCCTTTAACCTGGTGTTGTCAGGTCGCATTATGGAAGTAACGGGAACGCAGGTTTTCCTGGCTTTCCGCTGCGACGCGAAGGCGGGCGATACGCTGATTCTGAACACCGACGACGGTAAGCCAGTGCGCCGAACCATTGCCAGCGTATCAGCAGACGGAAAAACCCTGACGCTAAACGTGGGATATAACTTCGACGTTGCGCCGGACAGCGTATTCCTGATCGAAAGTGACCAACTGGCGGCTGAACAGTACGTTGTTACCAGGATTGAGAAGGGGAGCGATGACGACGAATTCACCTTTGCCATCACGGCTACGCAGTACGATCCGAACAAGTATGACGCGATCGACAATGGGGTAATTACCGATGGCCGACCAACTTCGGTTGTAGACCCGGATTCAATGGGCGCTCCGAAAGACTTAACGATTAGCTCGTTTTCTCGCATTGTTCAGGGAATGAGCGTCGAGACGATGGTGATCGGCTGGTCTGCCGTGCAGTATGCAAAACTGTACGAGGTGCAATGGCGCAAAGATGGCGGTAACTGGAACAACGTTCCTCGCACTGCGACAACGCAGGTTGATATTGAAGGCATCTATGCTGGCGAGTATCAGGCCCGCGTTAGGTGCATTAGCGGCGGGAATGTAGCGTCTCCGTGGTCTGCATTGGCAACCGCCACACTGACCGGGAAAGTCGGAGCGCCAAAAGGCCCGATTAACCTTTTTGCGTCGGACAATGAGATCTTCGGCATTCGCGTTAAGTGGGCCATGCCAGAAGGGGCGGAAGACACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGACGCAAGCCTGCTTACTCTGATTCCTTACCCGGCGGCTGAATACTGGCACTCAATTTTGCCCGCTGGCTACGTGAACTTCTACAAAGCCAGAAGCGTAGACCGGATCGGCAACGTTTCAGAATGGACTGATTACGCTCGCGGTATGTCGTCGACAGATGTTAACATCATCACGGATGCGATTCTGGATGAAATCCTGGACAGCGACGCGATGAAGGAGCTACAGGAAAGCGCACAGGATAGCGCGGCAAAACTAAATGACTACGCGAACAGCATCATTCAAAATGCGCTGGCGAATGATGCAGATGTTAGGCGAATGACGAAGGAGAACGGTAAGCGGAAGGCAGAGATCGCGCATACTACGGTGCTGATTGCCAACGAATCAGAAGCGAGGGCGGCTGAAATTACGGAGCTTAAAACGCAGATTGATGAAGATATCACATCGCAGATTACGATCCTTAATGAAGCGCTGGCGGATGAGAGCGAAACGAGGGCAACGCAAATTAACCAATTGCAAACTCAATTCGGCGAGGATATGGCCGCAGGGTTTACACAGGTTAATCAAGCAATTGCAAACGAGAGCGAGGCGCGAGCAAACTCTGAAGCGGCACTAGATGCCAAGATCGGGCAAAACTCCGCAGCGCTAGATCAGAAACTCGACTCGTGGGCAAACGTTAATGGCGTCGGTTCCATGTACACGATGAAGTTAGGTCTGAAGTATAACGGGAAGGAATATAATTCCGGGATGGCGTTACAGCTTACCGCACAAGGAAATAACGTTGTTTCGCAGGTGCTGTTCATTGCTGATAGATTTGCTATCATCCGCAATGCAGAGTCAGGCGCTTACACGCTACCGTTTGTTGTGCAGAATGACCAGGTGTTCATGAATAACGCTCTTATTCAGGATGGTTCTATTACCAACGCCAAGATCGGACAGTATATCCAGTCCAACAACTTCATTTCTGGACGGCAGGGGTGGATGATTAACAAGAATGGTGGTTCTGAATTTAATAACGTTGTCGTTCGCGGTGAGATGTATGCTGCGTCTGGTAAATTCGGATTTGATGGCGGAAACGGTGTGGTAATCAATGGTAATGGTATCACCGTCAACTTAGATGGTGGCGGGCGAATTGTTTTAGGGAGGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
715d28456e2e6e16f1654fb0952fde98fa4f43c67b13000e7a119d7a157ad861
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8108
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and Genomic Analysis of Seven Phages Active Against Carbapenem-Resistant Klebsiella pneumoniae Cuello,L., Parmar,K., Supandy,A., Van Tyne,D. and Patel,R. — — GenBank