Protein

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Genbank accession
XAO36038.1 [GenBank]
Protein name
tail spike protein with colonic acid degradation activity
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MALQRLSSELVKFKSYLTGSVERGLRNKLSDIVYVTDFGAKGDGVADDSAAFQAAIDAAGFQGEVWIPPAKVDWVFKQEVLIRTPICIRMIGGGSCVTTKQRNRIRVHGHINAFKLVPSQDGYMFGYGITGVHLADLRIEGDDLNSHGFQAVCVDESVNNGNYHVRECLFERNKIRYMDYGFNLRGICYLNEWYSNRCLWCSTACHVDRVSGATEGSSNQSRFFGNEFVMCDRALVLSTEGHHGSQTIIGNTLSEGKIGLLLGFNVQLCMMGNQVESNEWYGVNISIPANIQNPASEHSKLIVGNCFLSNGTDIVVAKNTTAFAGGFPFSLKIDDNSFAQTKQKVLEITAPTGPQEFDSSLFVLGRNNIFSKEGEQTVTVPPEMIPDGWKGYRGYQEDGKVTISGLVSGGQGQVVGRIVIPYGKQCYIKYTLANMNKLVSAGYASTAGSIRIVDATDPDSPKVLKDEFTSAGELFIPKVSANKTIVISSNSTDDSHVCASTVEYCIT
Physico‐chemical
properties
protein length:507 AA
molecular weight: 55355,00690 Da
isoelectric point:5,97153
aromaticity:0,09270
hydropathy:-0,13629

Domains

Domains [InterPro]
DC_2184
STR
1–503
DC_2184
IPR012334
STR
2–428
IPR012334
IPR011050
STR
30–316
IPR011050
IPR024535
ENZ
34–69
IPR024535
XAO36038.1
1 507
Architecture
STR
STR 1-503 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XAO36038.1
1 507
Domain Start End Length (AA) Confidence
N-terminal 1 48 48 0,9603
Central domain 49 371 324 0,9897
C-terminal 372 507 135 0,9026
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-48
Central
49-371
C-terminal
372-507

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage PSK8
[NCBI] 		3138290 Viruses >
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XAO36038.1 [NCBI]
Genbank nucleotide accession
PP541515.1 [NCBI]
CDS location
range 21991 -> 23514
strand +
CDS
ATGGCATTACAGAGACTTAGCTCTGAACTTGTTAAGTTCAAGTCATACCTTACTGGTTCTGTAGAGCGTGGTTTGAGAAATAAACTTAGTGATATTGTATATGTGACAGATTTTGGAGCTAAAGGTGATGGTGTTGCAGATGACTCAGCAGCATTCCAAGCAGCCATTGATGCAGCAGGTTTCCAAGGTGAAGTATGGATTCCACCTGCAAAAGTTGATTGGGTGTTTAAGCAAGAAGTCCTTATCCGTACACCTATATGCATTCGCATGATTGGTGGTGGCTCCTGTGTAACAACAAAGCAACGTAATCGCATTCGTGTGCATGGACACATCAATGCATTCAAGTTAGTACCATCCCAGGATGGATACATGTTTGGTTACGGTATCACAGGAGTACATTTAGCTGACCTTCGCATTGAAGGAGATGATCTTAATAGCCATGGCTTTCAAGCAGTATGCGTAGACGAGTCCGTTAATAATGGAAACTACCATGTACGTGAGTGCTTGTTTGAACGTAACAAGATACGATACATGGATTATGGTTTTAACCTTCGTGGTATATGCTACCTAAATGAGTGGTATAGTAATAGATGTCTATGGTGTTCTACTGCATGTCATGTAGATAGGGTAAGTGGTGCAACAGAAGGCTCTAGTAATCAGTCTCGCTTCTTTGGTAATGAGTTTGTAATGTGTGATAGGGCTTTAGTTCTTTCAACAGAAGGACATCATGGGTCACAGACAATTATCGGAAATACATTATCAGAGGGTAAGATAGGCTTACTGCTTGGTTTCAATGTACAACTATGCATGATGGGTAATCAGGTTGAAAGTAATGAATGGTATGGTGTTAATATTTCAATACCAGCAAACATTCAAAACCCTGCATCGGAGCACTCAAAACTCATCGTAGGTAATTGCTTCTTATCCAATGGGACAGATATTGTAGTAGCTAAGAATACAACGGCATTCGCTGGTGGTTTCCCATTCTCCCTGAAGATTGATGACAACTCTTTTGCTCAGACAAAGCAGAAAGTATTAGAGATAACTGCACCAACTGGACCTCAAGAGTTTGATTCTAGTTTGTTCGTATTAGGGCGCAATAATATCTTCTCTAAGGAAGGGGAGCAGACTGTCACCGTTCCTCCTGAAATGATTCCAGATGGTTGGAAAGGTTACAGAGGCTACCAAGAGGATGGTAAGGTAACTATCAGTGGGTTAGTGTCTGGTGGCCAAGGTCAAGTTGTTGGGCGTATAGTAATACCTTATGGTAAGCAATGCTACATTAAGTACACACTTGCAAATATGAATAAGTTAGTAAGTGCAGGGTATGCTTCTACCGCAGGTTCTATTCGTATAGTTGATGCCACAGACCCAGACAGCCCTAAGGTGTTGAAAGATGAGTTCACCTCTGCTGGTGAGTTGTTTATACCTAAGGTGTCTGCCAATAAGACAATTGTTATATCTTCTAACTCTACTGATGATTCACATGTCTGTGCATCTACTGTAGAGTATTGCATTACATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf7264e19ed30ea989e50cc7d33b5a304191a047bbf64cdb5715ede2c1148442
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7630
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50