Protein

Genbank accession
AGV99267.1 [GenBank]
Protein name
putative tail fiber
RBP type
TF
Evidence RBPdetect
Probability 0,62
Protein sequence
MANSLKQLMSLSEPELIGLGAQYGLSFHAGMKKSQMAQQLSQSAASGWMEVNKELMSESPDGTYDEMVGFHGTSDMLSDAAHAAQNIHAAGMGGAFQHYMSSGAGWQVEAIDDYLKQLGATAQDVWMHLPKEQEDSHPAAFRALSNYMRDTLVGHQDIMPEIKGHHSGDILKEYSTKLGNIQDSYEHLSHMYLDKSLYENGSQYAHDISRVSARLATQMGSRYLEVAASSAMGAHVSYMSTLPAVGDPSVVGNVAHARQPLNAAGLPLGSTGSAVAGREKYSLASSLTGLPENNPAAQSVYKSIQETVHNLAQVYKGGDNASTGMNPYKHRTSEYDMIMDSATRYNDVADVRSGYANLARELADEPSYSATNIRAILDNNHDKMDAESFAPVGIANPSFSHARLAEVGTSFTANLDSPTNWNSARMRREEKAIADLDASHANFRDVADGGQRSSGTTITYHDEVEQGSPEWHAMRSKYSITGSTIGSYLGNNAYTSPIKEMSDKLGINPKPRASNFDMERGHRLEPIARARVGREFGFNIGESGAITNSDYPDFLYSPDGLIGDDALWEHKAPRKFFDLKEHPDYNDQMQLGMLVSNRQRTLFSQTVGNETRSQWVERDPDWFNRNESRINSTLARMDVGHEVGSDNNFKTPEEAEQAARKAMTGEGIWGFRTKNSGEGYYTGGKRGMSRFSATAGTDADEFAGRRSAFEPNNEDNGYRPNFVMQDSTQTGLSVIGQGSGNGVAIYGQAPSESNPNSLTNSVKEGILLAQEENRQRRGFREINEEYAEDADFEEEGISRSRFDRSNGGGGRRGGGGGGGRTPNPWDEQFGGPAGGAVARGIAGGSVSSATNGLMTAMASTPWGRVAAVAAGAVQIGAELADNANESLGTAQDAGMTNPVAFASQRQGMEMLGLSENQALNVAQTTHSAYNTLLNGDSSGAVRLVQGTRGLLTISDIRETEGDPVALARIIQERGRERGWSQARVAGAMDMAGLGGMARTYQREGAVQRAAEAVRDDGAAAETDDAVTNTQVLRGVVRRASPEYGIQSAYFQHGANYAALAATGVQDALNVGNGVVNAGNSIAAGAENLEGRAKEFLDHFLPNAESGNREYDKHGNRITSPTGARGKYQILPSTARDPGFGLRPSDGTPQDDERLAREYMMTLVDRYNGDYEKANAAYTDGAGTVDKAVKNYGDDWLKHVPQQAQNRVAEYRKWSKSTGAIQQGAGGFAGSPMSNPVPTVINLNVNAQVNNKQATATVVATNGQTTTQTVNMGSGAQQRR
Physico‐chemical
properties
protein length:1279 AA
molecular weight: 137582,52630 Da
isoelectric point:5,42013
aromaticity:0,07115
hydropathy:-0,62533

Domains

Domains [InterPro]
IPR051703
423–630
IPR051703 G3DSA:1.10.530.10
IPR011604
453–643
IPR011604 IPR023346
IPR011335
463–630
IPR011335 IPR008258
IPR019080
470–598
IPR019080
AGV99267.1
1 1279
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Pectobacterium phage PM1
[NCBI] 		1399915 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pectobacterium carotovorum subsp. carotovorum
[NCBI] 		555 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Pectobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGV99267.1 [NCBI]
Genbank nucleotide accession
KF534715 [NCBI]
CDS location
range 37467 -> 41306
strand +
CDS
ATGGCAAATAGCTTAAAGCAGTTGATGAGTTTATCAGAACCAGAGTTGATTGGTTTAGGTGCTCAATATGGTCTATCCTTCCACGCTGGTATGAAGAAGTCGCAGATGGCTCAACAATTGAGTCAAAGTGCTGCGTCTGGTTGGATGGAAGTTAACAAAGAACTCATGTCAGAAAGCCCTGATGGAACATACGACGAAATGGTCGGGTTTCACGGCACTTCTGATATGCTGTCTGATGCTGCACACGCAGCTCAAAATATTCATGCCGCTGGAATGGGTGGAGCATTTCAACATTATATGAGTAGTGGTGCTGGTTGGCAGGTAGAAGCTATTGATGACTACCTCAAGCAACTCGGTGCCACTGCACAGGATGTTTGGATGCACTTGCCGAAAGAGCAAGAAGATTCTCACCCAGCGGCATTCCGAGCTTTGAGCAACTACATGCGGGATACTTTAGTTGGTCACCAAGACATCATGCCTGAGATTAAAGGGCATCATTCTGGTGACATCCTTAAAGAGTATTCTACAAAGCTTGGAAACATTCAGGATTCATATGAGCATCTGTCTCACATGTATCTTGACAAATCTTTGTACGAAAACGGGTCTCAATATGCGCATGACATTTCAAGAGTTTCTGCACGCTTGGCAACTCAAATGGGAAGCCGTTACTTGGAAGTTGCTGCAAGCTCTGCTATGGGTGCTCATGTATCGTATATGTCTACGTTACCTGCTGTTGGCGACCCGTCTGTTGTTGGGAATGTCGCTCATGCTCGTCAGCCTCTTAACGCTGCTGGACTTCCTCTAGGTTCAACTGGTTCTGCTGTGGCTGGTCGTGAGAAGTATTCTCTTGCATCATCTTTAACAGGTCTTCCGGAAAATAATCCTGCTGCACAATCTGTTTATAAAAGTATTCAAGAAACTGTACATAATCTTGCTCAGGTTTACAAGGGTGGGGATAATGCTTCAACAGGCATGAATCCATACAAACACCGAACTTCTGAGTATGACATGATTATGGATTCTGCAACTCGGTACAATGATGTTGCAGATGTTCGCTCTGGTTATGCCAACCTTGCAAGAGAATTGGCGGACGAACCAAGTTATTCAGCAACAAACATTCGTGCAATCTTGGATAACAACCACGACAAAATGGATGCGGAATCTTTCGCTCCTGTAGGCATTGCCAATCCGAGTTTTAGTCACGCACGTTTGGCGGAAGTTGGAACCAGTTTCACAGCAAACTTGGATTCACCAACGAATTGGAATAGTGCAAGAATGCGCAGAGAGGAAAAAGCAATTGCTGACCTCGATGCATCTCATGCAAACTTCCGTGATGTTGCGGATGGCGGACAAAGAAGTTCAGGAACAACCATAACGTACCATGATGAAGTTGAGCAAGGCTCTCCAGAATGGCACGCGATGCGAAGCAAGTATTCAATTACTGGCTCAACCATTGGTTCTTATCTTGGCAACAATGCGTACACCAGTCCAATAAAGGAAATGTCCGACAAGTTGGGCATCAATCCGAAGCCACGTGCTTCCAATTTTGATATGGAACGTGGTCACCGACTGGAACCTATCGCCCGCGCAAGGGTTGGTAGAGAGTTTGGATTTAATATTGGGGAATCCGGTGCAATCACGAACAGTGATTATCCTGACTTTCTGTACTCTCCTGACGGATTAATTGGGGATGATGCACTTTGGGAGCACAAAGCTCCAAGAAAGTTCTTCGACTTAAAAGAGCACCCCGATTACAACGACCAAATGCAACTTGGTATGTTGGTATCCAATCGTCAGCGAACATTGTTTTCGCAGACTGTAGGGAATGAAACTCGAAGCCAATGGGTTGAGCGTGACCCTGACTGGTTTAACAGAAATGAAAGCAGGATAAATTCAACTCTTGCTCGAATGGATGTTGGACATGAAGTTGGTTCTGACAACAATTTCAAGACACCAGAAGAAGCGGAGCAAGCTGCACGTAAGGCCATGACTGGTGAGGGCATTTGGGGATTCCGCACAAAGAATTCTGGCGAAGGTTACTACACTGGCGGCAAGCGTGGAATGTCTCGGTTCTCTGCAACTGCGGGAACTGACGCTGATGAGTTTGCCGGACGTCGCTCTGCGTTTGAACCCAACAATGAAGATAACGGCTACCGTCCAAACTTCGTAATGCAAGACAGCACTCAGACAGGATTGTCAGTTATTGGGCAAGGTTCAGGAAATGGTGTTGCCATTTATGGGCAAGCTCCATCCGAAAGCAATCCAAACTCATTAACCAATTCTGTTAAAGAGGGTATTCTCCTTGCTCAAGAGGAAAACAGACAAAGACGTGGATTCCGAGAAATCAACGAAGAGTATGCAGAAGATGCAGACTTCGAAGAAGAAGGTATCTCGCGCAGTCGTTTTGACCGTTCAAATGGTGGCGGTGGCCGTCGTGGTGGCGGTGGTGGCGGTGGAAGGACTCCAAATCCGTGGGATGAACAATTTGGTGGCCCCGCTGGTGGAGCGGTTGCTCGCGGAATTGCTGGCGGTTCTGTAAGTTCTGCAACAAACGGACTTATGACAGCAATGGCCTCAACTCCTTGGGGACGTGTAGCTGCTGTTGCTGCTGGTGCTGTTCAAATTGGTGCTGAACTTGCTGATAATGCAAACGAATCTTTGGGCACAGCTCAAGATGCAGGGATGACAAATCCAGTTGCATTCGCCAGTCAAAGGCAAGGCATGGAAATGCTTGGTCTAAGTGAAAACCAAGCACTAAATGTGGCACAAACCACACATTCCGCATACAACACCCTGCTGAATGGCGATAGCAGCGGCGCTGTGAGGCTCGTTCAGGGAACGCGTGGGTTACTAACCATTAGTGATATACGCGAGACTGAGGGCGACCCAGTGGCTCTGGCACGTATAATCCAAGAGCGTGGGCGGGAACGTGGGTGGAGTCAGGCGCGGGTAGCTGGCGCAATGGACATGGCCGGATTGGGCGGCATGGCTCGGACGTACCAGCGGGAAGGGGCTGTGCAACGCGCTGCTGAGGCCGTGCGGGACGATGGCGCTGCTGCTGAAACAGATGATGCGGTTACCAATACACAAGTGTTGCGTGGCGTGGTGAGGCGGGCTAGCCCCGAATACGGCATTCAAAGTGCCTACTTCCAGCATGGTGCAAACTATGCCGCACTTGCTGCAACTGGTGTTCAAGATGCGTTGAATGTTGGAAATGGTGTTGTTAATGCTGGCAATTCTATTGCTGCTGGTGCTGAGAATCTCGAAGGTCGAGCTAAAGAGTTTCTTGACCACTTCTTGCCAAATGCTGAATCTGGAAATCGTGAATATGATAAGCATGGCAATCGAATCACAAGCCCGACTGGTGCTCGTGGTAAGTACCAGATACTGCCTTCAACAGCACGTGACCCTGGGTTTGGTTTGAGGCCATCTGATGGCACTCCACAAGATGATGAGCGCCTTGCACGTGAATACATGATGACTCTGGTTGACCGATATAATGGCGATTATGAGAAAGCCAATGCTGCATACACAGATGGTGCTGGAACAGTTGATAAGGCTGTGAAGAACTACGGTGATGATTGGCTCAAACATGTACCACAACAAGCTCAGAATCGTGTTGCGGAATATCGCAAGTGGAGTAAATCAACTGGTGCAATTCAGCAAGGTGCTGGTGGCTTTGCTGGTTCTCCAATGTCCAATCCTGTTCCGACAGTCATTAACTTAAATGTCAATGCTCAGGTAAACAACAAGCAGGCAACTGCAACTGTTGTGGCAACAAATGGGCAAACCACAACTCAGACTGTAAACATGGGAAGTGGTGCTCAACAAAGACGTTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
8263eaab931a78e7a19ce86cbe15f67a0dd36cefddf130e6cc298c7aa0887f32
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2568
Evidence 0,2568
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of the Pectobacterium carotovorum subsp. carotovorum virulent bacteriophage PM1 Lim,J.A., Shin,H., Lee,D.H., Han,S.W., Lee,J.H., Ryu,S. and Heu,S. 2014 24643332 GenBank