Protein

View in Explore
Genbank accession
QJQ82607.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,67
Protein sequence
MTVKINGTNTVANPAFTGADTDTGLQCGTDELKLVTAGTSRATVDSSGRLLVGTSTARSAGDVTAQLQVEGTDFATSSLNLISNAGASAGNVPHISLGKSRGTSDGSSTAVADGDLLGKIQWCGADNTDLNASAASISAAVDGTPGGNDMPGRIIFATTSNSNDSPTERLRITSDGTLQLRNSPGIDFSQIQTNASGMSSETLDSYEEGTWTPAFTCNNVNFSYSDQSGFYTKIGNIVIVNFRLQMQSRTSGSGALNITGLPFSPTDSRCVLSLSPTFGNWGSNNAPNSGFTTGGDILLKKFDSSNAQDTQDTNVDPSIVSTAGIIGSMSYKIA
Physico‐chemical
properties
protein length:334 AA
molecular weight: 34338,13990 Da
isoelectric point:4,44426
aromaticity:0,05689
hydropathy:-0,23952

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QJQ82607.1
1 334
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,6649
Central domain 11 207 198 0,0289
C-terminal 208 334 126 0,9988
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-207
C-terminal
208-334

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-SBP1
[NCBI] 		2735125 Uroviricota > Caudoviricetes > Autographivirales > Spiovirus > Spiovirus sbp1
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QJQ82607.1 [NCBI]
Genbank nucleotide accession
MT424636.1 [NCBI]
CDS location
range 35713 -> 36717
strand +
CDS
ATGACTGTAAAAATTAACGGTACTAATACAGTTGCAAACCCAGCGTTTACCGGCGCTGACACAGATACGGGTTTGCAGTGTGGAACGGATGAGCTGAAGCTGGTTACTGCTGGAACGTCACGAGCAACAGTTGATAGCTCTGGGCGGTTGTTGGTGGGGACATCTACCGCTCGTTCCGCCGGAGATGTTACTGCTCAGTTGCAGGTAGAAGGAACAGATTTTGCAACTTCATCTCTGAATTTAATTTCTAACGCAGGAGCAAGTGCTGGAAACGTTCCTCACATTTCACTAGGAAAATCGCGTGGAACATCTGATGGTTCGTCCACAGCCGTTGCAGATGGAGACCTTTTAGGAAAGATTCAATGGTGTGGTGCAGATAACACTGACCTGAACGCCAGTGCTGCATCCATTAGTGCAGCAGTAGACGGCACTCCTGGCGGCAATGACATGCCAGGAAGAATAATTTTTGCGACCACATCAAACAGTAATGACAGTCCGACTGAGCGCCTGAGAATTACATCAGACGGCACGCTTCAGCTTCGCAACTCACCTGGTATTGACTTTAGTCAAATCCAAACCAATGCCTCTGGCATGTCTAGTGAAACGCTGGATAGCTACGAAGAGGGTACTTGGACGCCAGCGTTTACCTGTAATAACGTTAACTTTAGTTATTCTGATCAATCAGGTTTTTACACTAAAATTGGCAACATTGTTATCGTCAATTTTAGGCTTCAGATGCAATCAAGAACTTCTGGCTCAGGGGCTCTAAATATAACGGGTCTTCCCTTTAGCCCTACAGATAGTCGGTGTGTATTGAGTTTGTCCCCTACGTTTGGTAACTGGGGCAGTAATAATGCTCCGAACTCTGGATTTACCACTGGCGGCGATATTCTTCTTAAAAAATTTGACAGCTCTAATGCTCAGGATACACAAGACACAAATGTAGATCCTTCTATTGTCTCAACAGCCGGCATTATTGGAAGCATGTCTTACAAAATTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3bc22cac29dfac4dcf26fedcadeff50fb7e2f34d718e8b297e6e64ec91a31ac2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8065
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Programmed transcriptomes of a marine cyanopodovirus and its Synechococcus host during infection Huang,S. 2020-12-30 — GenBank