Protein

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Genbank accession
XYN15981.1 [GenBank]
Protein name
tail knob protein
RBP type
TSP
Evidence RBPdetect
Probability 0,55
Protein sequence
MTRRQITHITLLKNTPFNDFQNTVHFKSEAERDKALLGGLYERYDFEQPFHFVKDMGQFTAPIPYLECAGYNYCTFVEPETNIRYYAYIMKTEYDTAMTTKITIVIDVIMTWTQGQRLKGINNVNVMRQHLPTDIYKQRLEELRTNDDIIKTTTKRYVHQDAIQWKDFYVIFQSSANLEVDAGTVDKPKFVTSKGQTYDKITSPVNLYLCEFSKFNAIMQELQNYPWVSQNIKSILLIPKEFIDTSDIDDCKLLGKDDPNLKKLTNTGTSQGALLKGALRSMKEIGNFGGIDYEQEPHLLRSEYMTCEVYSYDGQNVNLDIAQLPSTGLQFELMNSIGYFNQIAIFPVNYGERNENIVGQFRKGKWLNNAIIYANFNELPNLVDNYKLGMAQGANQRQLAEDRLFSGRVQNILDPNGFNSFEGITSKVFDSMSLLSNGLSLSGVASKMSDEYEFYRTQRAQFADLKLSSPTVTNQSNGYSFQISNDIFGINVKYSAPTKAELNKIRQYYSMFGFEFNQQGEIYNPESMTICNYLKFTGSWTLQNIPTDQMQTLKSLFEGGIRFWHYDGSTNPMRQEVLKNRRV
Physico‐chemical
properties
protein length:583 AA
molecular weight: 67193,21990 Da
isoelectric point:5,94203
aromaticity:0,12350
hydropathy:-0,47942

Domains

Domains [InterPro]
IPR031772
TAS
6–114
IPR031772
IPR031772
TAS
6–110
IPR031772
DC_0080
STR
84–420
DC_0080
XYN15981.1
1 583
Architecture
TAS
STR
TAS 6-83 | STR 84-420 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYN15981.1
1 583
Domain Start End Length (AA) Confidence
N-terminal 1 185 185 0,8954
Central domain 186 394 210 0,3035
C-terminal 395 583 188 0,1345
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-185
Central
186-394
C-terminal
395-583

Taxonomy

  Name Taxonomy ID Lineage
Phage Enterococcus phage vB_Ela_1E1
[NCBI] 		3453355 Viruses >
Host Enterococcus sp.
[NCBI] 		35783 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYN15981.1 [NCBI]
Genbank nucleotide accession
PV927347 [NCBI]
CDS location
range 10179 -> 11930
strand -
CDS
ATGACACGTCGGCAAATCACACACATTACACTGTTAAAAAACACACCTTTCAACGATTTTCAAAATACCGTTCATTTTAAATCAGAAGCCGAACGTGATAAAGCTTTACTAGGTGGTTTATATGAACGTTATGATTTTGAACAACCGTTTCACTTTGTAAAGGACATGGGGCAATTTACTGCCCCCATTCCTTACTTAGAATGTGCAGGCTACAACTATTGTACCTTTGTAGAACCTGAAACAAACATTCGTTACTATGCCTATATCATGAAAACAGAATATGATACGGCAATGACAACAAAAATTACAATTGTTATTGACGTTATTATGACATGGACACAAGGACAACGATTAAAAGGAATTAATAACGTTAACGTTATGCGCCAACACTTACCAACAGATATTTACAAGCAACGCCTTGAGGAATTACGTACAAACGACGATATCATTAAAACAACAACAAAAAGGTATGTTCATCAAGACGCCATTCAATGGAAAGATTTCTACGTTATATTTCAATCGTCAGCTAACCTTGAAGTTGATGCTGGTACAGTAGACAAGCCAAAATTTGTAACATCAAAAGGTCAAACATATGACAAAATCACATCACCTGTAAACTTATACTTGTGCGAATTCTCTAAATTCAATGCTATCATGCAGGAGTTACAAAACTATCCTTGGGTATCTCAAAATATCAAATCTATCTTACTAATTCCAAAAGAGTTTATAGATACAAGCGATATTGATGATTGTAAATTACTAGGAAAAGATGACCCTAACTTGAAGAAATTAACAAATACAGGAACGTCACAAGGAGCTTTATTAAAAGGTGCTTTACGTTCAATGAAAGAAATCGGTAATTTTGGCGGTATTGATTATGAACAAGAACCCCATCTATTACGTTCAGAATATATGACTTGTGAGGTATATTCATACGACGGTCAAAATGTCAATCTAGACATTGCACAACTACCTTCGACAGGTTTACAATTTGAGTTAATGAACTCAATTGGTTACTTTAATCAAATAGCTATATTCCCTGTAAATTATGGCGAACGTAATGAAAACATTGTCGGACAATTCAGAAAGGGTAAATGGTTAAATAACGCGATCATTTATGCCAATTTCAACGAACTGCCTAACCTGGTAGATAATTACAAGTTAGGTATGGCACAAGGGGCAAATCAACGACAACTGGCAGAAGATAGACTTTTTTCAGGGCGTGTTCAAAACATTCTAGATCCTAACGGTTTTAATTCATTCGAGGGTATCACTTCAAAAGTATTTGATTCTATGTCCTTACTTTCTAACGGTCTATCTCTATCAGGTGTGGCATCTAAAATGTCGGACGAATACGAGTTTTATCGTACACAAAGAGCCCAATTTGCTGATTTAAAACTATCATCCCCAACAGTAACAAACCAATCAAATGGGTATTCATTTCAAATATCCAATGATATTTTCGGTATTAACGTAAAATATTCAGCACCTACAAAAGCAGAATTAAATAAAATACGTCAATATTATAGTATGTTTGGTTTTGAATTTAATCAACAAGGAGAAATTTATAATCCAGAATCTATGACCATATGTAACTACCTAAAATTCACAGGTTCATGGACGCTACAAAACATCCCAACCGATCAAATGCAAACACTAAAATCTCTATTTGAGGGTGGTATTCGTTTTTGGCATTATGACGGTTCAACAAATCCAATGAGACAAGAAGTATTGAAAAACAGGAGGGTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2a6a0a740ba672eb595edd21cc7415bc0b143376621ba9303df90afef9548fa1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8500
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50