Protein

View in Explore
Genbank accession
WDS61035.1 [GenBank]
Protein name
sericin 1 precursor-like protein
RBP type
TF
Evidence RBPdetect2
Probability 0,54
Protein sequence
MSQLNVDRIVSLGGGGGTAAIQLESSGNFNFDTGTLYVDSTNNEVGINTTTPRASLDIATTDSVIVPVGTTAQRSSSPIEGMFRYNSTDRTFEGYAFNEGANAVQWGPIAGAGGGGTPDQSTDRYSADYSVGAVLRSDGTDAYWDISGAPTGWTMSRIWTHGYVGGGYQSGSPWRNVNRTVHATDTSTNLGDTLDRSGAYMAGSFTDHRHYFHSMENTYRGSSNYTSGFSMTSEAGITHQGSWDMTVSRGSMGSFQDHEFAGGYSYLLGGGNARTDSMNLKTDVMRTSGYPQNHADGGDDPTHGGNARLKGWYKRSGTRQALVWNTESWVTWDNGPGGDGWKKILGSMLGHMYVGTGNNNQNGNQRVDDTTGLQTRGLNFGNMGEENFEMGMRKGYCLGNYNGSQNNNTFKVNYGTDAYNNLGGASPPTGHGGMSSAHCSSSSAISGVNDDGSRAYDYGTNIPNY
Physico‐chemical
properties
protein length:465 AA
molecular weight: 49603,85370 Da
isoelectric point:5,30554
aromaticity:0,10323
hydropathy:-0,70000

Domains

Domains [InterPro]
DC_0841
STR
1–270
DC_0841
IPR059888
RBD
46–111
IPR059888
WDS61035.1
1 465
Architecture
STR
STR 1-270 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-BM1
[NCBI] 		3021412 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WDS61035.1 [NCBI]
Genbank nucleotide accession
OQ319120 [NCBI]
CDS location
range 138502 -> 139899
strand +
CDS
ATGTCTCAATTAAATGTTGACAGAATAGTATCTTTAGGTGGAGGTGGTGGTACTGCTGCCATTCAGTTAGAATCTAGTGGTAACTTTAACTTTGATACTGGTACATTGTATGTTGACAGTACAAATAATGAAGTTGGTATCAATACAACGACACCCAGAGCATCTCTCGACATTGCTACTACTGATTCTGTAATCGTTCCTGTAGGTACTACTGCACAAAGATCTAGTTCTCCTATTGAGGGGATGTTCAGATATAACAGCACAGACCGAACATTTGAAGGATATGCCTTTAATGAAGGTGCAAATGCTGTTCAGTGGGGTCCTATTGCTGGTGCAGGTGGTGGTGGAACTCCCGACCAATCTACTGATAGATACAGTGCAGATTATTCTGTAGGTGCAGTATTACGCTCTGATGGTACTGATGCTTACTGGGATATTTCTGGTGCGCCAACTGGTTGGACCATGAGTAGAATCTGGACGCATGGTTATGTTGGAGGTGGATATCAAAGTGGTTCACCCTGGAGAAACGTAAATCGTACAGTTCACGCTACAGATACATCTACAAACCTTGGTGATACTCTGGATAGATCTGGTGCTTATATGGCAGGATCTTTTACAGATCATAGACATTATTTCCACTCGATGGAGAACACCTATAGAGGTTCGTCTAACTATACTTCTGGTTTCAGTATGACATCTGAGGCGGGTATTACGCACCAGGGATCATGGGACATGACTGTAAGTAGAGGTTCCATGGGTTCATTCCAAGACCATGAATTTGCTGGCGGTTATTCTTATCTTCTGGGTGGTGGTAACGCTAGAACTGACTCGATGAATCTCAAAACTGATGTTATGAGAACATCTGGTTATCCTCAAAACCATGCTGATGGTGGTGATGACCCCACACACGGTGGTAACGCAAGACTGAAAGGTTGGTATAAGCGTTCTGGCACACGTCAAGCACTTGTATGGAATACTGAATCTTGGGTTACTTGGGATAACGGTCCTGGTGGTGATGGATGGAAGAAGATCCTGGGTTCGATGTTAGGTCACATGTATGTTGGTACTGGTAATAACAACCAGAATGGCAATCAGCGTGTTGACGATACAACTGGACTTCAGACAAGAGGTTTGAACTTCGGTAACATGGGTGAGGAAAACTTTGAGATGGGTATGAGAAAAGGTTACTGCTTAGGTAACTATAATGGTTCTCAGAACAACAACACCTTTAAGGTGAACTATGGAACAGATGCCTACAATAACCTTGGTGGTGCTTCTCCACCAACTGGTCACGGTGGCATGAGTTCTGCACACTGCTCATCTTCTTCTGCTATTTCTGGTGTCAACGATGATGGTTCCAGAGCATATGATTATGGTACAAATATCCCTAACTACTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
0a01a72c27790f2f97756171c20c0964a90cff3b3d81c96e98988cc0bdb2e4ba
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3806
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50