Protein

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Genbank accession
YP_010054110.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence RBPdetect2
Probability 0,70
Protein sequence
MPVIHVQKMPGTPKETGIVPAGTNLWKWLNKSNLPASISIAVNGRVLGEDDELSFCLRDGDVVNVYCQPSGAIGDLIGAILKPVTKIFSFLTPKVSTPKTDTSSKTSPNTSLKAQTNIARNGEARPDNFGQIRAFPDLLQESLFEYINNIKYVTEFMNFGLGKYDVSSVRYSESNLGSLAGASYTIYQPGEVIPVVLEPYAFDDVDGQELYGPNDTNSVVIESATTTSVTSTDFAGGQIAVKIPKNSAFDYFVDLVMPHDVVFKLNITYALGGGTSVTENVTLSGSLVSASETDDGNIPPVDYWYTFIINNINYSGAPISSLSGATINNTYFNLTDNQPLVSGPYFSPIEGDQLWFHFVAQFGEDQGAIVKAEWWAVDDDNVQIAGSYQSTTYTFVAGGADTYYYTRKITPSYGSARYAVQFTRTNNSTQESIIQLDEVHSIVTRRNVSYPDDTVVKVIVRATENATGSRDRKYNALIMRHTIGYNRDTGTVRYTLAPSRSFADAVLHNWLITAGNPENTIDIVKLYEIADSLPDERLGYFDYTFDDEDKSIGERLQTICDAARVTAFWDDGVMSFSRDEKREYPATVFNTRNTQSDGYKLSYDISLPGTYDGVNVEYRDPTTNKQANVYYRITNSGIVEGEPTKAKKFDMLYVRNRYQAVDRAILECRRLIYSRRSMEIKALADGEWVNVGDMIQVVDMYDDVQQTGVIEARNGNALTTSEQLTADDNLYVVITSSDGSVSDRLPATVTGLHTFTCNLPSDFKLNIWDGTNVQSESRYVLSTEKELDTTLWVVSQKNPGSDGTTTLTMSEYSDDMYEYAIQSS
Physico‐chemical
properties
protein length:824 AA
molecular weight: 91359,36840 Da
isoelectric point:4,59324
aromaticity:0,10558
hydropathy:-0,33240

Domains

Domains [InterPro]
DC_0118
STR
1–666
DC_0118 DC_0808
NF040662
Unmapped
351–818
NF040662
YP_010054110.1
1 824
Architecture
STR
RBD
STR 1-666 | RBD 682-823 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_swi2
[NCBI] 		2769808 Uroviricota > Caudoviricetes > Swiduovirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010054110.1 [NCBI]
Genbank nucleotide accession
NC_054649 [NCBI]
CDS location
range 2352 -> 4826
strand -
CDS
ATGCCAGTAATTCATGTTCAGAAGATGCCGGGCACGCCGAAAGAAACGGGAATTGTGCCAGCTGGCACAAACCTGTGGAAGTGGCTGAATAAATCAAATCTTCCTGCCAGCATTTCAATTGCGGTAAATGGCAGAGTGCTTGGTGAAGATGATGAGCTTTCCTTCTGCCTGCGCGATGGCGACGTTGTCAACGTTTATTGTCAGCCATCCGGCGCAATCGGCGACCTGATCGGTGCGATACTGAAACCAGTAACGAAGATTTTCTCCTTCCTTACGCCGAAGGTATCCACACCCAAAACGGATACCAGCTCAAAAACATCACCAAATACCAGCCTGAAGGCACAGACTAACATTGCTCGTAACGGCGAGGCGCGCCCTGATAACTTCGGACAGATTCGTGCGTTTCCTGACTTACTTCAGGAATCATTATTCGAATACATCAATAATATTAAATACGTCACCGAGTTCATGAACTTTGGCCTCGGTAAGTATGATGTATCTTCTGTGCGTTATTCGGAATCAAACCTCGGCTCTCTGGCTGGCGCTAGTTACACCATTTATCAGCCTGGAGAAGTTATCCCTGTTGTTCTTGAACCTTACGCATTTGATGACGTTGACGGTCAGGAACTGTATGGGCCAAACGACACTAACTCTGTTGTCATTGAGTCAGCCACAACAACATCGGTGACCAGCACTGACTTTGCTGGCGGACAAATAGCTGTAAAAATACCAAAAAATTCCGCTTTCGATTACTTTGTTGATTTGGTTATGCCTCATGATGTGGTTTTCAAACTAAACATCACTTACGCGCTTGGCGGCGGCACGTCGGTCACTGAAAACGTCACCTTGTCAGGTAGTCTTGTGTCAGCATCAGAAACGGATGATGGAAATATTCCACCCGTTGATTACTGGTATACATTTATAATTAATAACATCAACTACTCAGGCGCACCGATATCATCCTTGAGTGGCGCAACCATCAATAACACTTACTTCAACCTTACTGATAACCAACCTCTTGTTTCAGGTCCGTATTTCTCACCAATAGAAGGTGATCAGCTGTGGTTCCACTTTGTTGCTCAATTTGGTGAAGATCAGGGTGCTATTGTCAAAGCTGAGTGGTGGGCGGTGGATGATGATAACGTGCAGATTGCAGGTTCATACCAATCAACCACATATACCTTTGTGGCTGGAGGAGCAGATACCTACTATTACACAAGAAAAATAACGCCATCATATGGTAGCGCCAGATACGCAGTTCAGTTTACAAGGACAAACAACAGCACCCAAGAATCAATCATTCAGCTTGATGAAGTGCATTCAATCGTCACGCGCAGAAACGTTTCGTATCCAGATGATACGGTGGTTAAGGTTATCGTGCGCGCAACGGAGAACGCAACAGGAAGCCGTGACAGGAAATATAATGCGCTAATCATGCGTCATACCATCGGATACAACCGGGATACTGGCACGGTGCGCTATACACTTGCACCATCTCGTAGCTTTGCTGATGCTGTTCTGCATAACTGGCTGATTACCGCTGGCAATCCAGAAAACACGATCGACATCGTGAAGCTGTATGAAATTGCCGATAGCCTGCCTGATGAGCGACTTGGGTATTTCGATTATACGTTTGACGATGAGGATAAGAGCATCGGTGAACGCCTGCAGACCATCTGCGATGCGGCGCGTGTCACCGCATTCTGGGATGATGGAGTGATGAGTTTCTCGCGTGATGAAAAACGCGAATATCCAGCTACTGTATTCAATACCAGAAACACGCAGAGCGATGGCTACAAACTGAGTTACGATATCAGCCTTCCCGGCACTTATGATGGCGTTAACGTCGAATATCGAGACCCAACAACGAATAAGCAGGCCAACGTTTACTATAGAATTACCAACAGCGGAATTGTAGAAGGCGAGCCAACTAAAGCGAAGAAATTCGACATGCTTTATGTTCGCAATCGATATCAGGCTGTTGACCGGGCAATCCTTGAATGTCGCAGGCTGATTTACTCTCGTCGCAGCATGGAAATTAAAGCGCTGGCAGATGGTGAATGGGTTAACGTAGGTGACATGATTCAGGTTGTAGATATGTACGATGACGTGCAACAGACTGGCGTTATTGAAGCGCGTAACGGGAACGCACTCACAACCAGCGAGCAGCTAACGGCTGATGATAATCTTTATGTTGTGATTACCAGTTCTGACGGCAGCGTATCAGACAGATTGCCAGCCACAGTAACTGGATTGCATACATTCACCTGCAATCTGCCATCAGATTTCAAGTTAAACATCTGGGATGGTACAAACGTGCAATCAGAATCTCGTTACGTGCTGAGCACTGAGAAAGAGCTTGATACCACGTTGTGGGTTGTCAGCCAGAAGAATCCGGGAAGTGACGGCACAACAACTCTGACCATGAGCGAATACAGCGACGACATGTACGAATATGCCATTCAGTCATCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
8c886bb48178db000c88ee58c64c7f148744716cef1adb30f10369ab4af14f12
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2976
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence analysis of a novel Escherichia phage vB_EcoS swi2 Sui,B. 2021-05-25 — GenBank