Protein

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Genbank accession
QSL99463.1 [GenBank]
Protein name
putative structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MADNLASFKVFCQGGLNTSRDVLSQGETQPGSAISLINYEPAVTGGYRKISGFSNDYGEVTGQANTPVLGVCVANGVNDGILACRLPQVGDDYLHYWDNATSAWVAVSVAAISPAPTMVGVTKVRFTKYNWGSPKVLLTDGINPAATYDGTTYTQISHADAPSAPRLSHVFKNHMFLAGDPSENTNLYFSAPYDETSFAAADGAGVINVGFPIVAIKSFRDVLYIFGSNNIRKLAGDNISNFVLQEVTDDLGCLATDSVIEIGGDLLFLSQDGLRPVSGTDKIGDVNLETVSKDIQSIFTDIVFDIDLETLNAVVIRQKTQFRYFFGAADSQGIIGGFRQTPNGLQFEYSQMLGITATCADSGYIGQNEFVIHGDSTGKVHRQERGNDFDGENIFSLFQTPFFHMQDPEQRKVFYTVATYLRSEGDNEIVMSALYDYEDVDTLSPTNFTLTTTGAAAYYNEALYDSTAIFDGNPAPVKRTNISGSGKSASFKFVTNDSNASHSIQGLVVTFGVGDRL
Physico‐chemical
properties
protein length:517 AA
molecular weight: 55844,39160 Da
isoelectric point:4,56368
aromaticity:0,10832
hydropathy:-0,11238

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QSL99463.1
1 517
Domain Start End Length (AA) Confidence
N-terminal 1 58 58 0,9849
Central domain 59 257 200 0,1008
C-terminal 258 517 259 0,4777
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-58
Central
59-257
C-terminal
258-517

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-9
[NCBI] 		2813174 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSL99463.1 [NCBI]
Genbank nucleotide accession
MW514246 [NCBI]
CDS location
range 35503 -> 37056
strand -
CDS
ATGGCTGACAATCTCGCCTCCTTCAAAGTATTCTGCCAAGGCGGTCTAAACACTAGTCGTGATGTGCTGTCACAAGGTGAGACTCAACCTGGTTCAGCTATCTCTTTGATTAACTACGAACCTGCTGTTACTGGTGGCTATCGTAAGATCAGTGGCTTTAGTAACGACTACGGTGAGGTAACAGGCCAAGCAAACACACCAGTGTTAGGTGTCTGTGTAGCTAACGGTGTCAACGATGGTATCTTAGCCTGTAGACTACCACAAGTAGGTGATGACTATCTACACTACTGGGATAATGCCACATCAGCTTGGGTTGCAGTAAGTGTAGCTGCCATTTCACCTGCTCCTACTATGGTAGGTGTAACTAAGGTACGCTTTACTAAGTATAACTGGGGTAGCCCTAAAGTACTTCTTACTGATGGCATTAACCCTGCAGCTACTTATGATGGTACAACATATACGCAGATAAGCCACGCAGATGCTCCCAGCGCACCTAGACTATCACACGTATTTAAGAACCACATGTTCCTAGCAGGTGACCCTAGTGAGAACACGAATCTTTATTTTAGCGCACCTTACGATGAGACTAGCTTTGCTGCTGCTGATGGTGCTGGTGTTATTAACGTAGGATTCCCTATCGTAGCTATCAAGTCTTTCCGTGATGTGTTGTACATTTTTGGTAGCAACAACATTCGTAAGTTAGCAGGTGACAACATCTCTAACTTTGTACTACAAGAAGTTACAGATGACCTTGGATGCCTAGCTACAGATAGTGTGATTGAGATCGGTGGTGACCTACTATTCTTATCACAAGATGGTCTACGCCCTGTTAGTGGTACAGACAAGATTGGTGACGTTAACCTAGAGACAGTATCAAAAGACATTCAGTCTATCTTTACTGACATTGTGTTTGACATTGATCTTGAAACACTTAACGCTGTAGTAATACGACAAAAGACACAGTTCCGTTACTTCTTTGGTGCAGCAGACTCACAGGGTATCATTGGTGGTTTCAGACAAACACCTAACGGTTTGCAGTTTGAGTATAGCCAGATGCTAGGTATCACAGCTACTTGTGCTGACAGTGGTTACATAGGACAGAACGAGTTTGTAATTCACGGTGACAGTACAGGTAAAGTACACAGACAAGAACGTGGCAATGACTTTGATGGTGAAAACATCTTTAGTTTATTCCAGACACCGTTCTTCCATATGCAAGACCCAGAGCAACGTAAAGTGTTTTATACTGTAGCTACATACTTACGTTCTGAAGGTGATAACGAGATTGTTATGTCTGCTTTATATGACTATGAAGATGTTGACACACTAAGTCCTACAAACTTTACACTAACAACTACAGGTGCAGCAGCTTACTATAATGAAGCACTGTATGACAGTACAGCAATCTTTGATGGTAACCCAGCACCAGTTAAAAGAACGAACATATCAGGCTCAGGTAAGTCAGCATCATTTAAATTCGTAACTAATGATTCCAATGCATCACACAGTATTCAAGGTCTAGTGGTTACATTCGGAGTAGGAGACAGGTTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
288610fef3b5171c9f4f70d1f8a7d9e2812219e5186e8d1304f6bba9c95cd14d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8792
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of two novel RCA phages reveals new insights into the diversity and evolution of marine viruses Zhao,Y. — — GenBank