Protein

View in Explore
Genbank accession
AKJ74368.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MESTTTPWVIKPWTDDNQWLTDAAAVVATLKQSKTDGYQPTVSDYVKFPGIETLLPPNAKGQNITSTLEIRECIGVEVHRASGLMAGFLFRGCHFCKMVDANNPSGGKDGIITFENLSGDWGKGNYVIGGRTSYGSVSSAQFLRNNGGFERDGGVIGFTSYRAGESGVKTWQGTVGSTTSRNYNLQFRDSVVFTPYGTDSI
Physico‐chemical
properties
protein length:201 AA
molecular weight: 21773,98240 Da
isoelectric point:6,11021
aromaticity:0,10945
hydropathy:-0,35174

Domains

Domains [InterPro]
IPR012332
STR
1–198
IPR012332
IPR015331
RBD
1–195
IPR015331
IPR011050
STR
1–196
IPR011050
AKJ74368.1
1 201
Architecture
STR
STR 1-198 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AKJ74368.1
1 201
Domain Start End Length (AA) Confidence
N-terminal 1 19 19 0,8032
Central domain 20 190 172 0,9873
C-terminal 191 201 10 0,1425
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-19
Central
20-190
C-terminal
191-201

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage 22
[NCBI] 		1654885 Uroviricota > Caudoviricetes > Lederbergvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKJ74368.1 [NCBI]
Genbank nucleotide accession
KR296686 [NCBI]
CDS location
range 30272 -> 30877
strand -
CDS
ATGGAAAGCACTACAACACCATGGGTTATCAAGCCTTGGACGGATGACAATCAGTGGCTAACGGATGCCGCAGCGGTCGTTGCCACTTTAAAACAATCTAAAACTGATGGGTATCAGCCAACCGTAAGCGATTACGTTAAATTCCCAGGAATAGAAACGTTACTCCCACCTAATGCAAAAGGGCAAAACATAACGTCTACGTTAGAAATTAGAGAATGTATAGGGGTCGAAGTTCATCGGGCTAGCGGTCTAATGGCTGGTTTTTTGTTTAGAGGGTGTCACTTCTGCAAGATGGTAGACGCCAATAATCCAAGCGGAGGTAAAGATGGCATTATAACCTTCGAAAACCTTAGCGGCGATTGGGGGAAGGGTAACTATGTCATTGGCGGACGAACCAGCTATGGGTCAGTAAGTAGCGCCCAGTTTTTACGTAATAATGGTGGCTTTGAACGTGATGGTGGAGTTATTGGGTTTACTTCATATCGCGCTGGGGAGAGTGGCGTTAAAACTTGGCAAGGTACTGTGGGCTCGACAACCTCTCGCAACTATAATCTGCAATTCCGCGACTCGGTCGTATTTACCCCGTATGGGACGGATTCGATTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
72dd89ba56f0bf42dfaf5748252ce7395e7f1aa62f61074bcc61200ce2dac223
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6208
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50