Protein

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Genbank accession
QKE54601.1 [GenBank]
Protein name
putative virion structural protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLECLLGGAPAVKDTGPGPQDLVKSYKAGPGKLTGFYGRVGSEDFITYSQLRNMVNVSGALSTDIGWMKLHIDGKVLFVPRSPICTNITWNQIYNAGAVYGIPGAGVVFNNLTPKNQNLTIVVQGYKFLVRCFVGANSNPVGIDNGGARDSSLTKGCEYDRLILNMGVSIQSANQEGPIFGYEFSNPSTAVHVANYSYSAFNGTQYTLSRNEGWASAYNPTWASTSVGWLPVLELLGKA
Physico‐chemical
properties
protein length:239 AA
molecular weight: 25634,74080 Da
isoelectric point:8,28369
aromaticity:0,10879
hydropathy:-0,05858

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QKE54601.1
1 239
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,7715
Central domain 11 207 198 0,0257
C-terminal 208 239 31 0,9984
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-207
C-terminal
208-239

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalM_SA002
[NCBI] 		2739752 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica subsp. enterica serovar Heidelberg
[NCBI] 		611 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QKE54601.1 [NCBI]
Genbank nucleotide accession
MN445183 [NCBI]
CDS location
range 234356 -> 235075
strand +
CDS
ATGTTAGAATGTTTACTTGGCGGAGCGCCAGCCGTAAAAGACACAGGACCCGGCCCGCAGGATTTGGTGAAGTCTTACAAGGCCGGGCCGGGTAAACTCACCGGATTCTACGGCCGCGTGGGATCTGAGGACTTCATCACATACAGTCAACTGCGCAACATGGTAAACGTGTCCGGTGCGTTAAGTACCGATATCGGTTGGATGAAGCTCCACATTGACGGTAAAGTCCTTTTTGTACCACGTAGCCCTATTTGCACAAACATTACGTGGAATCAAATTTATAACGCGGGTGCGGTATATGGTATCCCCGGAGCGGGGGTGGTCTTCAACAACTTAACACCAAAAAATCAAAATCTGACCATAGTGGTGCAGGGGTATAAGTTTTTGGTGCGGTGTTTTGTTGGGGCTAACAGTAACCCCGTGGGTATTGACAACGGCGGTGCACGTGATAGCTCATTAACCAAGGGTTGCGAATACGATCGTTTGATTTTGAACATGGGTGTGTCGATACAATCAGCTAACCAGGAAGGACCTATATTCGGTTATGAGTTTTCAAACCCCTCAACGGCGGTGCATGTCGCCAACTACTCTTATTCGGCATTTAACGGAACCCAATACACGTTATCACGTAACGAAGGATGGGCCAGTGCATATAACCCAACATGGGCGTCGACTTCAGTCGGCTGGCTACCTGTGTTAGAGTTACTGGGTAAAGCTTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
8294d7dabd0e224f088fb5365a8150f489eb3fa40a76eafa122799246474814c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6954
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50